NT genes of 'Lonepinella sp. MS14434'
In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
| Gene name | Gene type | Function | Related MGE | Organism | Genome accession | Locus tag | Protein ID |
|---|---|---|---|---|---|---|---|
 comE1/comEA |
Machinery gene | DNA binding and uptake | Prophage | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS00995 | WP_386692529.1 |
| ceuB |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS02890 | WP_386692865.1 |
| rec2 |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS04530 | WP_386693181.1 |
| pilF/pilF2 |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS05395 | WP_386690655.1 |
| comQ |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS05645 | WP_386690744.1 |
| comN |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS05660 | WP_386690751.1 |
| pilC |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS06380 | WP_386690993.1 |
| pilB |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS06385 | WP_386690995.1 |
| pilA |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS06390 | WP_386690997.1 |
| comE |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS06685 | WP_386691137.1 |
| dprA |
Machinery gene | DNA processing | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS09005 | WP_386691859.1 |
| recA |
Machinery gene | Homologous recombination | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS09030 | WP_386691867.1 |
| comM |
Machinery gene | Involve in natural transformation | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS10260 | WP_386693394.1 |
| ssb |
Machinery gene | DNA processing | - | Lonepinella sp. MS14434 | NZ_CP170386 | O1Q79_RS10390 | WP_386692301.1 |
Experimentally validated
Bioinformatically predicted