oriTDB
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  • oriT 16
  • Relaxase 16
  • Auxiliary protein 0
  • Relaxosome 0
  • T4CP 5
  • T4SS 2
Taxonomy filter:     Level: genus    Name: Sphingobium    

Source:   

Evidence:

oriT ID oriT name Species Sequence
completeness  
nic site   Accessory function
of plasmid
100064 in_silico oriT_pPDL2 Sphingobium fuliginis core TATCCCG|C Degradation
100589 in_silico oriT_pPBA Sphingobium wenxiniae intact TATCCTG|C
100618 in_silico oriT_pTKS Sphingobium sp. TKS intact TATCCTG|C
103686 in_silico oriT_pl5 Sphingobium sp. AntQ-1 - _
103937 in_silico oriT_YC-JY1|unnamed5 Sphingobium yanoikuyae - _
104141 in_silico oriT_YC-XJ3|unnamed3 Sphingobium sp. YC-XJ3 - _
105736 in_silico oriT_pUT2 Sphingobium indicum - _
118437 in_silico oriT_pYAN-1 Sphingobium yanoikuyae - _
118438 in_silico oriT_pSY2 Sphingobium chungbukense - _
118439 in_silico oriT_pSHV3 Sphingobium herbicidovorans - _
118946 in_silico oriT_HAMBI_1842|unnamed06 Sphingobium yanoikuyae - _
119310 in_silico oriT_SC-1|unnamed6 Sphingobium baderi - _
121466 in_silico oriT_pSAMIE_7 Sphingobium amiense - _
121995 in_silico oriT_pTK8 Sphingobium sp. TKS - _
121996 in_silico oriT_pTK9 Sphingobium sp. TKS - _
122590 in_silico oriT_pDE7 Sphingobium baderi - _

View allView Less
    experimental Experimentally validated     insolico Bioinformatically predicted

    Links
    Contact
    Microbial Bioinformatics Group in MML, SJTU

    Current version: 2.0
    Since: May 2017
    Recently update: Jun. 2024