Statistics

Taxonomic distribution

Type:  
Species  45 Genus  30 Family  21 Order  15 Class  8 Phylum  4 Superkingdom  1

Species

Total oriT count 116

Escherichia coli

19

Staphylococcus aureus

11

Bacteroides fragilis

7

Klebsiella pneumoniae

6

Enterococcus faecalis

5

Salmonella enterica

5

Streptococcus agalactiae

5

Lactococcus lactis

4

Vibrio cholerae

4

Rhizobium leguminosarum

3

Pseudomonas putida

3

Rhizobium etli

2

Bacillus subtilis

2

Sinorhizobium fredii

2

Pseudomonas aeruginosa

2

Pseudomonas savastanoi

2

Klebsiella aerogenes

2

Lactococcus cremoris

2

Neisseria gonorrhoeae

2

Clostridium perfringens

2

Aeromonas salmonicida

2

Aeromonas hydrophila

1

Legionella pneumophila

1

Staphylococcus equorum

1

Bacteroides uniformis

1

Photobacterium damselae

1

Mesorhizobium japonicum

1

Providencia rettgeri

1

Vibrio vulnificus

1

Vibrio fluvialis

1

Bacteroides sp.

1

Streptococcus thermophilus

1

Agrobacterium fabrum

1

Sinorhizobium meliloti

1

Advenella kashmirensis

1

Mycobacteroides abscessus

1

Enterococcus faecium

1

Shigella flexneri

1

Pectobacterium carotovorum

1

Acidithiobacillus ferridurans

1

Burkholderia cenocepacia

1

Citrobacter freundii

1

Bordetella bronchiseptica

1

Acidithiobacillus ferrooxidans

1

Acidiphilium multivorum

1

Genus

Total oriT count 116

Family

Total oriT count 116

Order

Total oriT count 116

Class

Total oriT count 116

Phylum

Total oriT count 116

Superkingdom

Total oriT count 116

Bacteria

116
Species  968 Genus  223 Family  87 Order  41 Class  16 Phylum  10 Superkingdom  2

Species

Total oriT count 22924

Escherichia coli

8065

Klebsiella pneumoniae

5352

Salmonella enterica

1607

Staphylococcus aureus

1117

Enterobacter hormaechei

678

Citrobacter freundii

291

Klebsiella quasipneumoniae

255

Shigella flexneri

200

Enterococcus faecium

188

Escherichia fergusonii

181

Shigella sonnei

170

Enterobacter cloacae

146

Enterococcus faecalis

136

Lactococcus lactis

131

Klebsiella michiganensis

130

Klebsiella variicola

115

Proteus mirabilis

99

Rhizobium leguminosarum

93

Klebsiella oxytoca

93

Escherichia albertii

92

Serratia marcescens

91

Enterobacter roggenkampii

86

Yersinia pestis

77

Klebsiella aerogenes

77

Klebsiella grimontii

73

Raoultella ornithinolytica

72

Enterobacter asburiae

71

Sinorhizobium meliloti

67

Staphylococcus epidermidis

65

Agrobacterium tumefaciens

59

Pseudomonas aeruginosa

58

Vibrio cholerae

58

Lactiplantibacillus plantarum

56

Rhizobium ruizarguesonis

53

Enterobacter kobei

49

Serratia proteamaculans

45

Lactococcus cremoris

45

Streptococcus salivarius

40

Neisseria gonorrhoeae

33

Raoultella planticola

32

Salmonella sp.

32

Citrobacter portucalensis

32

Streptococcus suis

31

Bacillus subtilis

29

Citrobacter koseri

29

Streptococcus pneumoniae

28

Leclercia adecarboxylata

28

Morganella morganii

27

Providencia stuartii

26

Ligilactobacillus salivarius

26

Xylella fastidiosa

25

Clostridium perfringens

25

Rhizobium phaseoli

25

Latilactobacillus sakei

23

Citrobacter braakii

22

Aeromonas caviae

22

Pseudomonas syringae

21

Pseudosulfitobacter pseudonitzschiae

18

Shigella dysenteriae

18

Aeromonas hydrophila

18

Lactococcus garvieae

18

Aeromonas salmonicida

17

Bradyrhizobium japonicum

16

Staphylococcus capitis

16

uncultured bacterium

16

Shigella boydii

15

Levilactobacillus brevis

15

Aeromonas veronii

15

Escherichia marmotae

15

Enterococcus hirae

15

Bifidobacterium longum

14

Staphylococcus haemolyticus

13

Serratia entomophila

13

Sinorhizobium fredii

13

Staphylococcus argenteus

13

Aeromonas dhakensis

13

Cronobacter sakazakii

12

Edwardsiella tarda

12

Agrobacterium vitis

12

Vibrio alginolyticus

12

Providencia rettgeri

12

Streptococcus agalactiae

12

Erwinia amylovora

11

Enterobacter ludwigii

11

Staphylococcus warneri

11

Phytobacter diazotrophicus

10

Serratia nevei

10

Lacticaseibacillus paracasei

10

Latilactobacillus curvatus

10

Bacillus cereus

10

Streptococcus dysgalactiae

10

Escherichia sp.

10

Bacillus velezensis

9

Yersinia enterocolitica

9

Glaesserella parasuis

9

Vibrio parahaemolyticus

9

Staphylococcus saprophyticus

9

Paenibacillus larvae

9

Rhizobium etli

9

Bradyrhizobium barranii

9

Agrobacterium fabrum

8

Lactobacillus crispatus

8

Streptococcus thermophilus

8

Clostridioides difficile

8

Citrobacter amalonaticus

8

Candidatus Hamiltonella defensa

8

Sinorhizobium medicae

8

Hafnia alvei

7

Citrobacter werkmanii

7

Leuconostoc mesenteroides

7

Staphylococcus hominis

7

Ensifer adhaerens

7

Listeria monocytogenes

7

Streptococcus gallolyticus

7

Proteus terrae

7

Staphylococcus lugdunensis

7

Pseudomonas putida

7

Proteus vulgaris

6

Enterococcus durans

6

Citrobacter youngae

6

Citrobacter sp. CRE-46

6

Staphylococcus equorum

6

Streptococcus pyogenes

6

Klebsiella sp. RHBSTW-00484

6

Mesorhizobium loti

6

Serratia liquefaciens

6

Lactococcus formosensis

6

Rhizobium beringeri

6

Photobacterium damselae

6

Yersinia ruckeri

6

Bacillus pumilus

6

Bacillus thuringiensis

6

Hafnia paralvei

6

Sinorhizobium americanum

6

Providencia alcalifaciens

6

Shewanella algae

6

Rhizobium rhizogenes

6

Klebsiella sp. WP3-W18-ESBL-02

6

Salmonella sp. SSDFZ54

6

Klebsiella huaxiensis

5

Legionella pneumophila

5

Lactiplantibacillus paraplantarum

5

Pantoea agglomerans

5

Staphylococcus arlettae

5

Acinetobacter baumannii

5

Klebsiella pasteurii

5

Delftia acidovorans

5

Pediococcus inopinatus

5

Staphylococcus xylosus

5

Pediococcus pentosaceus

5

Staphylococcus pasteuri

5

Klebsiella sp. RHBSTW-00464

5

Enterobacter bugandensis

5

Moellerella wisconsensis

5

Klebsiella sp. RHBSTW-00215

5

Edwardsiella piscicida

5

Rhizobium gallicum

5

Enterobacter cloacae complex sp.

5

Rhizobium tropici

4

Kluyvera cryocrescens

4

Xanthomonas translucens

4

Enterococcus gallinarum

4

Faecalibacterium duncaniae

4

Agrobacterium pusense

4

Xanthomonas arboricola

4

Acinetobacter pittii

4

Aeromonas sp. WP2-W18-CRE-05

4

Acinetobacter lwoffii

4

Streptococcus anginosus

4

Staphylococcus cohnii

4

Sinorhizobium kummerowiae

4

Klebsiella sp. WP4-W18-ESBL-05

4

Pantoea stewartii

4

Klebsiella electrica

4

Serratia sarumanii

4

Pasteurella multocida

4

Serratia plymuthica

4

Citrobacter sedlakii

4

Achromobacter xylosoxidans

4

Escherichia sp. 10290

4

Citrobacter sp. CFNIH10

4

Enterobacter cloacae complex sp. EB5

4

Aminobacter sp. SR38

4

Comamonas testosteroni

4

Burkholderia cenocepacia

4

Enterobacter chuandaensis

4

Acinetobacter bereziniae

4

Enterococcus casseliflavus

4

Tetragenococcus halophilus

4

Salmonella sp. JXY0409-18

4

Enterobacter sp. JBIWA005

4

Klebsiella sp. WP3-S18-ESBL-05

4

Mammaliicoccus lentus

4

Agrobacterium leguminum

4

Actinobacillus pleuropneumoniae

4

Carnobacterium maltaromaticum

4

Yersinia pseudotuberculosis

4

Vagococcus lutrae

4

Paracoccus yeei

3

Rhizobium sp. C104

3

Agrobacterium salinitolerans

3

Pseudochrobactrum algeriensis

3

Bacillus paranthracis

3

Enterobacter cloacae complex sp. ECL352

3

Aeromonas taiwanensis

3

Paracoccus sediminicola

3

Streptococcus parauberis

3

Phaeobacter inhibens

3

Companilactobacillus farciminis

3

Lacticaseibacillus rhamnosus

3

Lactococcus sp. bn62

3

Enterobacter sp. MGH 14

3

Enterobacter sp. MGH 3

3

Aminobacter sp. MSH1

3

Escherichia sp. KS167_9B

3

Lactococcus sp. NH2-7C

3

Sphingobium yanoikuyae

3

Enterobacter sp. JH25

3

Citrobacter farmeri

3

Streptococcus equi

3

Weissella cibaria

3

Enterobacter cancerogenus

3

Leuconostoc citreum

3

Klebsiella sp.

3

Kluyvera intermedia

3

Klebsiella quasivariicola

3

Klebsiella sp. FDAARGOS_511

3

Citrobacter sp.

3

Aminobacter aminovorans

3

Lactobacillus amylovorus

3

Staphylococcus casei

3

Variovorax paradoxus

3

Citrobacter sp. RHBSTW-00696

3

Klebsiella sp. P1954

3

Pseudomonas fragi

3

Pseudomonas amygdali

3

Enterobacter cloacae complex sp. ECL404

3

Citrobacter sp. RHBSTW-00053

3

Vagococcus fluvialis

3

Staphylococcus pseudintermedius

3

Rhizobium laguerreae

3

Rhizobium johnstonii

3

Sphingobium sp. TKS

3

Shinella sp. HZN7

3

Mammaliicoccus sciuri

3

Bordetella petrii

3

Enterobacter sp. RHBSTW-00974

3

Geobacillus thermodenitrificans

3

Mesorhizobium japonicum

3

Enterobacter sp. RHBSTW-00131

3

Edwardsiella ictaluri

3

Alteromonas mediterranea

3

Lactobacillus helveticus

3

Mesorhizobium ciceri

3

Acidithiobacillus caldus

3

Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1

3

Lactiplantibacillus pentosus

3

Clostridium botulinum

2

Salmonella sp. A7

2

Salmonella sp. SAL-045

2

Paracoccus sp. SCSIO 75233

2

Streptococcus parasuis

2

Salmonella sp. A39

2

Listeria innocua

2

Priestia flexa

2

Macrococcus equipercicus

2

Salmonella sp. SAL-007

2

Citrobacter cronae

2

Vagococcus intermedius

2

Leuconostoc carnosum

2

Vibrio furnissii

2

Afipia carboxidovorans

2

Leuconostoc kimchii

2

Prevotella intermedia

2

Burkholderia contaminans

2

Rhizobium indigoferae

2

Shinella zoogloeoides

2

Citrobacter sp. BIDMC108

2

Pseudomonas sp.

2

Bhargavaea cecembensis

2

Yersinia massiliensis

2

Enterococcus italicus

2

Rhizobium sp. BT03

2

Acinetobacter nosocomialis

2

Erwinia sp. Ejp617

2

Salmonella sp. SA15303

2

Pararhizobium qamdonense

2

Bradyrhizobium septentrionale

2

Yersinia aleksiciae

2

Phocaeicola salanitronis

2

Leclercia sp. LSNIH3

2

Sulfitobacter dubius

2

Citrobacter freundii complex sp. CFNIH3

2

Citrobacter sp. RHBSTW-00446

2

Legionella anisa

2

Pseudomonas syringae group genomosp. 7

2

Bifidobacterium catenulatum

2

Citrobacter freundii complex sp. CFNIH4

2

Bacillus safensis

2

Citrobacter freundii complex sp. CFNIH9

2

Raoultella terrigena

2

Pantoea sp. PSNIH2

2

Bacillus pseudomycoides

2

Companilactobacillus futsaii

2

Citrobacter sp. MGH103

2

Pediococcus claussenii

2

Ligilactobacillus acidipiscis

2

Klebsiella sp. LY

2

Tatumella morbirosei

2

Sinorhizobium mexicanum

2

Nocardioides sp. JS614

2

Klebsiella africana

2

Klebsiella sp. P1927

2

Acidovorax sp. JS42

2

Citrobacter pasteurii

2

Bordetella pertussis

2

Burkholderia ambifaria

2

Escherichia sp. SCLE84

2

Lacticaseibacillus casei

2

Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1

2

Salmonella sp. SJTUF14523

2

Klebsiella sp. WP7-S18-CRE-02

2

Klebsiella sp. WP7-S18-ESBL-04

2

Klebsiella sp. WP7-S18-CRE-03

2

Bacillus toyonensis

2

Burkholderia cepacia

2

Bacteroides finegoldii

2

Enterobacter cloacae complex sp. ECL414

2

Bacillus altitudinis

2

Sinorhizobium terangae

2

Parabacteroides distasonis

2

Bacillus anthracis

2

Allorhizobium ampelinum

2

Rhizobium bangladeshense

2

Staphylococcus sp. CDC25

2

Klebsiella sp. PL-2018

2

Brevibacillus composti

2

Erwinia pyrifoliae

2

Fluoribacter dumoffii

2

Sinorhizobium numidicum

2

Kluyvera ascorbata

2

Aeromonas sp. ASNIH4

2

Alcaligenes faecalis

2

Aeromonas sp. ASNIH3

2

Enterobacter sp. RHBSTW-00975

2

Pseudorhizobium flavum

2

Lelliottia amnigena

2

Escherichia sp. HH154_1D

2

Sphingobium baderi

2

Salmonella sp. SJTUF14154

2

Psychrobacter sp.

2

Pseudomonas fluorescens

2

Macrococcoides caseolyticum

2

Leclercia pneumoniae

2

Rhizobium sp. Kim5

2

Klebsiella sp. WP8-S18-ESBL-06

2

Aminobacter sp. SS-2016

2

Salmonella sp. A29-2

2

Bacillus mycoides

2

Bacillus badius

2

Staphylococcus hyicus

2

Leclercia sp. LSNIH1

2

Enterobacter cloacae complex sp. ECL411

2

Staphylococcus simulans

2

Enterobacter sp. RHBSTW-00318

2

Oceanobacillus oncorhynchi

2

Streptococcus oralis

2

Rhizobium sp. N741

2

Mycobacteroides abscessus

2

Pseudomonas cerasi

2

Sphingomonas sp. IC081

2

Agrobacterium sp. MA01

2

Klebsiella sp. RHBSTW-00465

2

Agrobacterium larrymoorei

2

Cupriavidus pinatubonensis

2

Levilactobacillus zymae

2

Bacteroides faecis

2

Vibrio fluvialis

2

Mesorhizobium sp. WSM1497

2

Rhizobium sp. N1341

2

Rhizobium esperanzae

2

Acidovorax sp. T1

2

Rhizobium sullae

2

Rhizobium sp. CB3060

2

Limosilactobacillus fermentum

2

Agrobacterium rubi

2

Sinorhizobium chiapasense

2

Rhizobium sp. N871

2

Limosilactobacillus reuteri

2

Pectobacterium carotovorum

2

Vibrio vulnificus

2

Pseudomonas coronafaciens

2

Corynebacterium renale

2

Planococcus sp. (in: firmicutes)

2

Spiroplasma kunkelii

2

Rhizobium sp. N621

2

Rhizobium sp. N6212

2

Shinella sumterensis

2

Yersinia frederiksenii

2

Rhizobium sp. WSM1274

2

Pseudomonas sp. EGD-AKN5

2

Rhizobium sp. N113

2

Providencia huaxiensis

2

Xanthomonas cucurbitae

2

Methylophaga frappieri

2

Serratia sp. SSNIH1

2

Pectobacterium versatile

2

Rhizobium favelukesii

2

Phaeobacter piscinae

2

Leclercia sp.

2

Rhizobium sp. Pop5

2

Actinobacillus sp.

2

Staphylococcus rostri

2

Xenorhabdus nematophila

2

Phocaeicola dorei

2

Bacteroides fragilis

2

Enterococcus dispar

2

Dickeya solani

2

Variovorax sp. SRS16

2

Mesorhizobium sp. NBSH29

2

Rhizobium sp. CCGE 510

2

Enterobacter sp. RHBSTW-00340

2

Streptococcus mitis

2

Salmonella sp. S13

2

Phytobacter ursingii

2

Fluviibacter phosphoraccumulans

2

Priestia endophytica

2

Bacillus amyloliquefaciens

2

Parageobacillus thermoglucosidasius

2

Staphylococcus petrasii

2

Enterobacter mori

2

Alteromonas macleodii

2

Pararhizobium polonicum

2

Geobacillus stearothermophilus

2

Loigolactobacillus backii

2

Burkholderia multivorans

2

Blastomonas sp. RAC04

2

Lactiplantibacillus argentoratensis

2

Kosakonia cowanii

2

Aeromonas media

2

Phyllobacterium zundukense

2

Rhodanobacter sp. T12-5

2

Dichelobacter nodosus

2

Enterobacter sp. RHBSTW-00422

2

Staphylococcus pettenkoferi

2

Staphylococcus sp. 693-2

1

Oceanisphaera sp. IT1-181

1

Shewanella sp. JNE7

1

Marinobacter adhaerens

1

Enterobacter sp. W001

1

Siccibacter colletis

1

Acinetobacter sp. YH12138

1

Bacillus intermedius

1

Vibrio metoecus

1

Escherichia sp. Sflu5

1

Klebsiella sp. BDA134-6

1

Rhizobium sp. TH2

1

Escherichia sp. TM-G17TGC

1

Pectobacterium parvum

1

Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1

1

Acinetobacter piscicola

1

Planococcus sp. ZOYM

1

Mesorhizobium sp. AR07

1

Acinetobacter chinensis

1

Psychrobacter sp. P11G3

1

Shewanella xiamenensis

1

Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1

1

Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1

1

Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1

1

Acinetobacter calcoaceticus

1

Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1

1

Sphaerotilus microaerophilus

1

Herminiimonas arsenicoxydans

1

Shewanella sp. NFH-SH190041

1

Marinobacter shengliensis

1

Devosia neptuniae

1

Enterobacter sp. 155105

1

Salmonella sp. 3C

1

Pseudomonas sp. DR208

1

Pseudomonas sp. ADPe

1

Bacteroides ovatus

1

Pseudomonas umsongensis

1

Limosilactobacillus vaginalis

1

Xanthomonas euvesicatoria

1

Streptococcus pasteurianus

1

Clostridium tetani

1

Enterococcus lactis

1

Butyricimonas faecalis

1

Tolumonas auensis

1

Providencia sp. PROV046

1

Providencia sp. PROV040

1

Muribaculum gordoncarteri

1

Alteromonas sp. Mex14

1

Klebsiella sp. w6

1

Limosilactobacillus portuensis

1

Citrobacter freundii complex sp. CFNIH2

1

Acidovorax sp. SUPP3334

1

Flavobacterium sp. TR2

1

Furfurilactobacillus rossiae

1

Mesorhizobium sp. SEMIA 3007

1

Providencia sp. PROV109

1

Carnobacterium sp.

1

Bacteroides xylanisolvens

1

Providencia sp. PROV100

1

Mesorhizobium sp. NZP2298

1

Kluyvera georgiana

1

Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2

1

Mesorhizobium sp. NZP2234

1

Komagataeibacter xylinus

1

Avibacterium paragallinarum

1

Roseburia hominis

1

Providencia sp. PROV101

1

Providencia sp. PROV102

1

Providencia sp. PROV073

1

Lactiplantibacillus carotarum

1

Aminobacter niigataensis

1

Cupriavidus metallidurans

1

Providencia sp. PROV081

1

Providencia sp. PROV103

1

Streptococcus parasanguinis

1

Sinorhizobium sojae

1

Lachnoclostridium sp. YL32

1

Paraburkholderia xenovorans

1

Planococcus citreus

1

Escherichia sp. RL97

1

Pseudomonas furukawaii

1

Rhizobium sp. SU303

1

Chitinibacter bivalviorum

1

Xanthomonas vesicatoria

1

Rhizobium sp. T136

1

Streptomyces griseorubiginosus

1

Bacteroides caecimuris

1

Mesorhizobium opportunistum

1

Staphylococcus sp. HL28

1

uncultured bacterium MID12

1

Aminobacter sp. NyZ550

1

Acidiphilium multivorum

1

Shewanella sp. W3-18-1

1

Komagataeibacter medellinensis

1

Mesorhizobium australicum

1

Sphingomonas sp. MM-1

1

Methylomonas sp. LL1

1

Providencia sp. PROV002

1

Providencia sp. PROV003

1

Providencia sp. PROV001

1

Erysipelothrix rhusiopathiae

1

Ornithobacterium rhinotracheale

1

Pseudoalteromonas sp. M8

1

Pectobacterium atrosepticum

1

Providencia sp. PROV006

1

Barnesiella viscericola

1

Cetobacterium somerae

1

Pseudomonas sp. JS3066

1

Acinetobacter junii

1

Burkholderia plantarii

1

Pseudomonas sp. AO-1

1

Vibrio paracholerae

1

Filifactor alocis

1

Macrococcoides canis

1

Enterobacter sp. CRENT-193

1

Planococcus sp. MB-3u-03

1

Pseudomonas ficuserectae

1

Pacificitalea manganoxidans

1

Thauera sp. K11

1

Oligella ureolytica

1

Roseibium sp. Sym1

1

Bacillus siamensis

1

Methylotuvimicrobium alcaliphilum

1

Enterobacter sichuanensis

1

Burkholderia sp. PAMC 28687

1

Cycloclasticus zancles

1

Pseudenterobacter timonensis

1

Nitratidesulfovibrio vulgaris

1

Pectobacterium sp. A5351

1

Haemophilus parainfluenzae

1

Variovorax sp. RA8

1

Aquicella lusitana

1

Dickeya parazeae

1

Mesorhizobium sp. R88B

1

Streptococcus cristatus

1

Sphingobium amiense

1

Vibrio rumoiensis

1

Mageeibacillus indolicus

1

Carnobacterium divergens

1

Acetobacter pasteurianus

1

Lentilactobacillus hilgardii

1

Enterococcus saigonensis

1

Variovorax sp. PBL-E5

1

Acinetobacter oleivorans

1

Citrobacter sp. RHBSTW-00107

1

Citrobacter sp. RHBSTW-00848

1

Citrobacter sp. MGH105

1

Proteus genomosp. 6

1

Advenella sp. S44

1

Klebsiella sp. KP20-425-1

1

Klebsiella sp. KCL-2

1

Citrobacter sp. On28M

1

Citrobacter sp. Res13-Lact-LER2-35-b

1

Mesorhizobium sp. AA22

1

Lentilactobacillus buchneri

1

Escherichia sp. SB17040

1

Escherichia sp. SB17042

1

Escherichia sp. RL320

1

Escherichia sp. SB18102

1

Escherichia sp. HBI02

1

Escherichia sp. SB17032

1

Escherichia sp. HBI03

1

Escherichia sp. HBI05

1

Paracoccus aminovorans

1

Bacillus sp. N3378-2at

1

Serratia fonticola

1

Paracoccus aminophilus

1

Salinigranum marinum

1

Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1

1

Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1

1

Streptococcus alactolyticus

1

Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1

1

Pantoea dispersa

1

Pseudomonas sp. 2,4-D

1

Raoultella sp. DY2415

1

Pediococcus acidilactici

1

Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1

1

Sphingobium herbicidovorans

1

Sphingobium chungbukense

1

Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1

1

Escherichia sp. HBI04

1

Escherichia sp. SB18001

1

Staphylococcus kloosii

1

Nitrincola iocasae

1

Klebsiella sp. KPN54798

1

Streptococcus constellatus

1

Lactobacillus gasseri

1

Shinella sedimenti

1

Cronobacter malonaticus

1

Shewanella halifaxensis

1

Riemerella columbina

1

Citrobacter sp. RHBSTW-00821

1

Citrobacter sp. B72

1

Citrobacter sp. RHBSTW-00678

1

Clostridium estertheticum

1

Riemerella anatipestifer

1

Parabacteroides sp. CT06

1

Mesorhizobium erdmanii

1

Psychromicrobium lacuslunae

1

Escherichia sp. SB17037

1

Escherichia sp. SB18004

1

Escherichia sp. SB17033

1

Escherichia sp. SB17103

1

Mesorhizobium jarvisii

1

Escherichia sp. SB18002

1

Escherichia sp. RL316

1

Thauera sp. 2A1

1

Escherichia sp. SB17034

1

Salmonella sp. SJTUF14076

1

Xanthomonas phaseoli

1

Salmonella sp. SJTUF14170

1

Shigella sp. FC1139

1

Escherichia sp. SB18003

1

Escherichia sp. PS15001

1

Acinetobacter variabilis

1

Staphylococcus shinii

1

Citrobacter sp. 21OH12SH02A-Citro

1

Sphingobium sp. AntQ-1

1

Ralstonia pickettii

1

Leclercia sp. 29361

1

Serratia grimesii

1

Rhizobium sp. ACO-34A

1

Pluralibacter gergoviae

1

Serratia ficaria

1

Rhizobium sp. SL42

1

Sphingobium sp. YC-XJ3

1

Aeromonas allosaccharophila

1

Vibrio sp. JC009

1

Celeribacter indicus

1

Acinetobacter sp. NEB 394

1

Bartonella schoenbuchensis

1

Burkholderia pyrrocinia

1

Mesorhizobium sp. L-2-11

1

Fructilactobacillus cliffordii

1

Enterococcus wangshanyuanii

1

Ketogulonicigenium robustum

1

Aromatoleum anaerobium

1

Aromatoleum buckelii

1

Nitratireductor sp. GZWM139

1

Mesorhizobium sp. DCY119

1

Rhizobium grahamii

1

Enterobacter sp. Res13-Sevr-PEC09-36

1

Enterobacter sp. Res13-Sevr-PEC09-46

1

Paenalcaligenes suwonensis

1

Rhizobium sp. N1314

1

Rhizobium sp. N731

1

Pandoraea apista

1

Companilactobacillus allii

1

Clostridium saccharoperbutylacetonicum

1

Lentilactobacillus parabuchneri

1

Klebsiella sp. LTGPAF-6F

1

Agrobacterium sp. RAC06

1

Francisella sp. MA067296

1

Pediococcus damnosus

1

Phaeobacter gallaeciensis

1

Streptococcus infantis

1

Aromatoleum aromaticum

1

Cupriavidus basilensis

1

Proteus sp. ZN5

1

Staphylococcus sp. SB1-57

1

Citrobacter tructae

1

Cupriavidus oxalaticus

1

Shewanella sp. SNU WT4

1

Delftia tsuruhatensis

1

Agrobacterium vaccinii

1

Streptococcus equinus

1

Ancylobacter polymorphus

1

Mixta theicola

1

Rouxiella badensis

1

Enterobacter chengduensis

1

Weissella paramesenteroides

1

Salmonella sp. SAL-020

1

Citrobacter sp. RHBSTW-00570

1

Xanthomonas perforans

1

Citrobacter sp. RHBSTW-00229

1

Citrobacter sp. RHBSTW-01013

1

Citrobacter sp. RHB35-C21

1

Shewanella sp. LC6

1

Enterococcus gilvus

1

Proteus penneri

1

Rhizobium sp. K102

1

Pararhizobium gei

1

Bradyrhizobium quebecense

1

Klebsiella sp. CTHL.F3a

1

Nostoc sphaeroides

1

Edwardsiella anguillarum

1

Sphingobium indicum

1

Enterococcus avium

1

Shewanella bicestrii

1

Oenococcus oeni

1

Superficieibacter sp. HKU1

1

Pectobacterium zantedeschiae

1

Dickeya fangzhongdai

1

uncultured eubacterium pIE1115

1

Pseudomonas sp. ADP

1

Sphingomonas sp. A1

1

Bacillus sp. (in: firmicutes)

1

Streptococcus sp.

1

Collimonas fungivorans

1

uncultured bacterium HH1107

1

Pseudomonas syringae group genomosp. 3

1

Sphingopyxis alaskensis

1

Bifidobacterium bifidum

1

Delftia sp. KV29

1

Variovorax sp. DB1

1

Salmonella sp. 14

1

Advenella kashmirensis

1

Streptococcus macedonicus

1

Candidatus Accumulibacter phosphatis

1

Alicycliphilus denitrificans

1

Streptococcus pseudopneumoniae

1

Pseudomonas sp. CT14

1

Pseudomonas sp. MC1

1

Salmonella sp. M9397

1

Bacillus sp. 24

1

Sphingobium fuliginis

1

Bacillus sp. DMV2

1

Psychrobacter maritimus

1

Burkholderia sp.

1

Agrobacterium radiobacter

1

Achromobacter denitrificans

1

Sporosarcina ureae

1

Pseudomonas alcaligenes

1

Halomonas elongata

1

Loigolactobacillus rennini

1

uncultured bacterium HHV216

1

uncultured bacterium HHV35

1

Acidithiobacillus ferrooxidans

1

uncultured marine bacterium

1

uncultured bacterium AST4

1

Comamonas sp. 7D-2

1

Paracidovorax avenae

1

Verminephrobacter eiseniae

1

Paenibacillus farraposensis

1

Citrobacter sp. RHBSTW-00271

1

Enterobacter sp. Res13-Sevr-PEC09-47

1

Ochrobactrum sp. Res13-Abat-PEA25-P4-02

1

Acinetobacter lactucae

1

Lactococcus piscium

1

Acinetobacter terrestris

1

Salmonella sp. D5-9891

1

Klebsiella sp. AqSCr

1

Clostridium tertium

1

Shewanella sp. ALD9

1

Pseudomonas oleovorans

1

Escherichia sp. S10b

1

Bacillus licheniformis

1

Citrobacter sp. RHBSTW-00509

1

Citrobacter sp. RHBSTW-00671

1

Alcanivorax sp. N3-2A

1

Thiomonas intermedia

1

Azotobacter chroococcum

1

Planococcus kocurii

1

Weissella jogaejeotgali

1

Bifidobacterium breve

1

Pantoea sp. PSNIH1

1

Acinetobacter sp. M131

1

Sphingobium wenxiniae

1

Novosphingobium pentaromativorans

1

Cupriavidus nantongensis

1

Pandoraea pnomenusa

1

Tardibacter chloracetimidivorans

1

Pseudomonas frederiksbergensis

1

Rhodoferax koreense

1

Enterobacter cloacae complex sp. ECNIH7

1

Cupriavidus necator

1

Sinorhizobium sp. RAC02

1

Novosphingobium resinovorum

1

Xanthomonas hyacinthi

1

Providencia vermicola

1

Roseobacter denitrificans

1

Micromonospora sp. NBRC 110009

1

Roseovarius sp. THAF9

1

Ligilactobacillus faecis

1

Aeromonas sp. FDAARGOS 1407

1

Streptococcus canis

1

Achromobacter pestifer

1

Pseudomonas sp. KHPS1

1

Rhizobium anhuiense

1

Rhizobium brockwellii

1

Diaphorobacter sp. JS3051

1

Citrobacter sp. S40-1-2

1

Citrobacter sp. H12-3-2

1

Lactobacillus sp. CBA3606

1

Virgibacillus sp. SK37

1

Rhizobium sp. BT04

1

Lactobacillus sp.

1

Ruminococcus albus

1

Achromobacter ruhlandii

1

Lactococcus raffinolactis

1

Enterococcus sp. E1123

1

Mesorhizobium mediterraneum

1

Agrobacterium sp. 33MFTa1.1

1

Escherichia sp. SA17023

1

Escherichia sp. PS16002

1

Escherichia sp. PS310-R

1

Escherichia sp. PS184-R

1

Escherichia sp. SA17022

1

Bacillus sp. DX3.1

1

Rhizobium lusitanum

1

Aeromonas sobria

1

Pseudomonas thivervalensis

1

Aeromonas sp. pRIVM0001_VIM-1

1

Enterobacter sp. 247

1

Neorhizobium galegae

1

Clostridium sp. 16K-1-R1

1

Ensifer canadensis

1

Citrobacter sp. RHBSTW-00986

1

Legionella sp. PC997

1

Raoultella sp. HC6

1

Roseateles sp. XES5

1

Comamonas sp. C11

1

Agrobacterium sp. CGMCC 11546

1

Achromobacter sp.

1

Serratia sp. JSRIV004

1

Enterobacter sp. MGH 7

1

Enterobacter sp. BWH 37

1

Pseudomonas sp. TMW 2.1634

1

Allorhizobium pseudoryzae

1

Rhizobium sp. K1/93

1

Rhizobium sp. K15/93

1

Planococcus sp. MB-3u-09

1

Rhizobium sp. B21/90

1

Rhizobium sp. B230/85

1

Acinetobacter sp. YH16056_T

1

Bacillus sp. LJBS17

1

Shinella sp. XGS7

1

Lactococcus sp. LG1267

1

Lactobacillus sp. PC121B

1

Lactococcus sp. LG592

1

Bordetella bronchiseptica

1

Raoultella sp. XY-1

1

Rhodanobacter sp. FDAARGOS 1247

1

Leclercia sp. G3L

1

Polaromonas sp. H1N

1

Shigella sp. LN126

1

Agrobacterium sp. T29

1

Enterobacter cloacae complex sp. AR_0002

1

Citrobacter sp. Y3

1

Diaphorobacter sp. JS3050

1

Diaphorobacter sp. HDW4A

1

Serratia sp. FDAARGOS_506

1

Pantoea sp. CCBC3-3-1

1

Rahnella sikkimica

1

Neorhizobium sp. SOG26

1

Escherichia sp. SA17101

1

Escherichia sp. SA17024

1

Sinorhizobium sp. M14

1

Rhizobium sp. NXC24

1

Rhizobium sp. TAL182

1

Weissella confusa

1

Rhizobium acidisoli

1

Rhizobium sp. CCGE532

1

Rhizobium sp. CCGE531

1

Rhizobium jaguaris

1

Rhizobium sp. NXC14

1

Sinorhizobium sp. CCBAU 05631

1

Rhizobium daejeonense

1

Rhizobium oryzihabitans

1

Neisseria musculi

1

Citrobacter arsenatis

1

Hartmannibacter diazotrophicus

1

Rhizobium sp. CIAT894

1

Corynebacterium crudilactis

1

Thauera aromatica

1

Pseudomonas sp. LM8

1

Pseudomonas sp. ZM1

1

Desulfovibrio desulfuricans

1

Clostridium sp. MT351

1

Bibersteinia trehalosi

1

Yokenella regensburgei

1

Sinorhizobium garamanticum

1

Caballeronia grimmiae

1

Ochrobactrum quorumnocens

1

Arsenophonus nasoniae

1

Aeromonas sp.

1

Delftia lacustris

1

Komagataeibacter europaeus

1

Lactobacillus acidophilus

1

Leuconostoc lactis

1

Bradyrhizobium sp. ISRA436

1

Bradyrhizobium sp. ISRA437

1

Bradyrhizobium sp. ISRA443

1

Acinetobacter johnsonii

1

Comamonas fluminis

1

Rhizobium indicum

1

Pseudomonas viridiflava

1

Pseudomonas avellanae

1

Paenalkalicoccus suaedae

1

Salmonella sp. SJTUF15034

1

Rhodopseudomonas palustris

1

Trabulsiella odontotermitis

1

Shewanella baltica

1

Nitrobacter hamburgensis

1

Pseudomonas sp. BYT-5

1

Staphylococcus sp. NRL 16/872

1

Citrobacter sp. 36-4CPA

1

Citrobacter rodentium

1

Escherichia sp. HBI01

1

Yersinia rochesterensis

1

Ruficoccus sp. ZRK36

1

Pseudomonas sp. BYT-1

1

Phytobacter sp. MRY16-398

1

Bacillus sp. ZHX3

1

Rhizobium sp. CB3090

1

Pannonibacter phragmitetus

1

Staphylococcus sp. T93

1

Desulfosporosinus acidiphilus

1

Rhizobium binae

1

Rhizobium sp. 007

1

Rhizobium sp. ZX09

1

Rhizobium rosettiformans

1

Rhizobium sp. NZLR1

1

Staphylococcus caprae

1

Enterobacter sp. JBIWA003

1

Rhizobium sp. 32-5/1

1

Rhizobium sp. NLR16a

1

Rhizobium sp. CB3171

1

Shigella sp. FC130

1

Providencia sp. 21OH12SH02B-Prov

1

Enterobacter sp. JBIWA008

1

Sinorhizobium alkalisoli

1

Deefgea piscis

1

Genus

Total oriT count 22901

Escherichia

8405

Klebsiella

6177

Salmonella

1675

Staphylococcus

1309

Enterobacter

1116

Citrobacter

462

Shigella

406

Enterococcus

363

Rhizobium

281

Lactococcus

210

Serratia

180

Streptococcus

169

Pseudomonas

128

Proteus

115

Sinorhizobium

112

Raoultella

109

Aeromonas

103

Yersinia

103

Agrobacterium

102

Bacillus

89

Vibrio

89

Lactiplantibacillus

67

Providencia

61

Mesorhizobium

45

Leclercia

38

Neisseria

34

Clostridium

33

Latilactobacillus

33

Acinetobacter

32

Bradyrhizobium

31

Ligilactobacillus

29

Morganella

27

Xylella

25

Edwardsiella

21

Lactobacillus

19

Pseudosulfitobacter

18

Bifidobacterium

18

Levilactobacillus

17

Burkholderia

16

Shewanella

16

Sphingobium

16

Erwinia

15

Lacticaseibacillus

15

Leuconostoc

15

Xanthomonas

15

Aminobacter

14

Pediococcus

14

Pantoea

14

Cronobacter

13

Phytobacter

13

Hafnia

13

Paracoccus

10

Kluyvera

10

Paenibacillus

10

Vagococcus

9

Glaesserella

9

Bacteroides

9

Shinella

9

Listeria

9

Variovorax

8

Candidatus Hamiltonella

8

Ensifer

8

Delftia

8

Clostridioides

8

Achromobacter

8

Pectobacterium

8

Legionella

8

Cupriavidus

7

Planococcus

7

Comamonas

7

Mammaliicoccus

7

Weissella

6

Carnobacterium

6

Actinobacillus

6

Alteromonas

6

Phaeobacter

6

Companilactobacillus

6

Photobacterium

6

Limosilactobacillus

6

Bordetella

6

Pararhizobium

5

Geobacillus

5

Moellerella

5

Acidovorax

5

Dickeya

4

Pasteurella

4

Tetragenococcus

4

Sphingomonas

4

Psychrobacter

4

Faecalibacterium

4

Acidithiobacillus

4

Phocaeicola

4

Priestia

4

Aromatoleum

3

Corynebacterium

3

Parabacteroides

3

Thauera

3

Loigolactobacillus

3

Lentilactobacillus

3

Pseudochrobactrum

3

Diaphorobacter

3

Komagataeibacter

3

Allorhizobium

3

Rhodanobacter

3

Macrococcoides

3

Lelliottia

2

Neorhizobium

2

Mycobacteroides

2

Advenella

2

Bhargavaea

2

Sulfitobacter

2

Afipia

2

Pseudorhizobium

2

Fluoribacter

2

Spiroplasma

2

Novosphingobium

2

Pandoraea

2

Prevotella

2

Riemerella

2

Blastomonas

2

Parageobacillus

2

Marinobacter

2

Dichelobacter

2

Brevibacillus

2

Macrococcus

2

Alcaligenes

2

Nocardioides

2

Tatumella

2

Methylophaga

2

Ochrobactrum

2

Fluviibacter

2

Oceanobacillus

2

Kosakonia

2

Phyllobacterium

2

Xenorhabdus

2

Nitrincola

1

Aquicella

1

Haemophilus

1

Cetobacterium

1

Methylomonas

1

Psychromicrobium

1

Streptomyces

1

Acidiphilium

1

Tardibacter

1

Furfurilactobacillus

1

Ketogulonicigenium

1

Muribaculum

1

Butyricimonas

1

Avibacterium

1

Siccibacter

1

Salinigranum

1

Oligella

1

Verminephrobacter

1

Oceanisphaera

1

Francisella

1

Nitratidesulfovibrio

1

Ornithobacterium

1

Erysipelothrix

1

Barnesiella

1

Collimonas

1

Pseudoalteromonas

1

Paraburkholderia

1

Roseburia

1

Lachnoclostridium

1

Tolumonas

1

Herminiimonas

1

Paenalcaligenes

1

Sphingopyxis

1

Cycloclasticus

1

Devosia

1

Methylotuvimicrobium

1

Pacificitalea

1

Pseudenterobacter

1

Acetobacter

1

Filifactor

1

Mageeibacillus

1

Nitratireductor

1

Roseibium

1

Chitinibacter

1

Yokenella

1

Arsenophonus

1

Fructilactobacillus

1

Caballeronia

1

Desulfovibrio

1

Bibersteinia

1

Hartmannibacter

1

Thiomonas

1

Azotobacter

1

Paracidovorax

1

Mixta

1

Ancylobacter

1

Superficieibacter

1

Candidatus Accumulibacter

1

Oenococcus

1

Sporosarcina

1

Nostoc

1

Alcanivorax

1

Rouxiella

1

Bartonella

1

Alicycliphilus

1

Pannonibacter

1

Desulfosporosinus

1

Polaromonas

1

Rhodoferax

1

Virgibacillus

1

Ruminococcus

1

Rahnella

1

Roseateles

1

Sphaerotilus

1

Celeribacter

1

Deefgea

1

Roseovarius

1

Micromonospora

1

Paenalkalicoccus

1

Rhodopseudomonas

1

Nitrobacter

1

Trabulsiella

1

Ruficoccus

1

Ralstonia

1

Roseobacter

1

Pluralibacter

1

Halomonas

1

Flavobacterium

1

Family

Total oriT count 22899

Enterobacteriaceae

18442

Staphylococcaceae

1321

Rhizobiaceae

524

Streptococcaceae

379

Enterococcaceae

376

Yersiniaceae

285

Lactobacillaceae

236

Morganellaceae

211

Pseudomonadaceae

129

Aeromonadaceae

105

Bacillaceae

104

Vibrionaceae

95

Phyllobacteriaceae

62

Lysobacteraceae

40

Moraxellaceae

36

Comamonadaceae

36

Nitrobacteraceae

35

Neisseriaceae

34

Hafniaceae

34

Clostridiaceae

33

Erwiniaceae

32

Roseobacteraceae

30

Burkholderiaceae

28

Sphingomonadaceae

26

Pasteurellaceae

22

Alcaligenaceae

20

Bifidobacteriaceae

18

Shewanellaceae

16

Bacteroidaceae

13

Pectobacteriaceae

12

Paenibacillaceae

12

Paracoccaceae

11

Legionellaceae

10

Planococcaceae

10

Listeriaceae

9

Peptostreptococcaceae

8

Carnobacteriaceae

6

Alteromonadaceae

6

Oscillospiraceae

6

Acetobacteraceae

5

Brucellaceae

5

Acidithiobacillaceae

4

Piscirickettsiaceae

3

Tannerellaceae

3

Zoogloeaceae

3

Corynebacteriaceae

3

Rhodocyclaceae

3

Weeksellaceae

3

Rhodanobacteraceae

3

Prevotellaceae

2

Lachnospiraceae

2

Sphaerotilaceae

2

Chitinibacteraceae

2

Marinobacteraceae

2

Nocardioidaceae

2

Methylococcaceae

2

Cardiobacteriaceae

2

Desulfovibrionaceae

2

Fluviibacteraceae

2

Spiroplasmataceae

2

Oxalobacteraceae

2

Mycobacteriaceae

2

Stappiaceae

2

Coxiellaceae

1

Streptomycetaceae

1

Francisellaceae

1

Filifactoraceae

1

Erysipelotrichaceae

1

Alcanivoracaceae

1

Pseudoalteromonadaceae

1

Halomonadaceae

1

Fusobacteriaceae

1

Barnesiellaceae

1

Haloferacaceae

1

Xanthobacteraceae

1

Nostocaceae

1

Pleomorphomonadaceae

1

Micromonosporaceae

1

Cerasicoccaceae

1

Flavobacteriaceae

1

Devosiaceae

1

Desulfitobacteriaceae

1

Micrococcaceae

1

Bartonellaceae

1

Muribaculaceae

1

Odoribacteraceae

1

Oceanospirillaceae

1

Order

Total oriT count 22900

Class

Total oriT count 22901

Phylum

Total oriT count 22901

Superkingdom

Total oriT count 22924

Bacteria

22923

Archaea

1

Antibiotic resistance genes carried by oriT-harboring plasmids

Antibiotic resistance genes carried by oriT-harboring ICEs/IMEs

Virulence factor genes carried by oriT-harboring plasmids

Virulence factor genes carried by oriT-harboring ICEs/IMEs

Metal resistance genes carried by oriT-harboring plasmids

Metal resistance genes carried by oriT-harboring ICEs/IMEs

Degradation genes carried by oriT-harboring plasmids

Degradation genes carried by oriT-harboring ICEs/IMEs

Symbiosis genes carried by oriT-harboring plasmids

Symbiosis genes carried by oriT-harboring ICEs/IMEs

Anti-CRISPRs carried by oriT-harboring plasmids

Anti-CRISPRs carried by oriT-harboring ICEs/IMEs