Statistics

Taxonomic distribution


Type:  

Phylum

Total oriT count 116


Superkingdom

Total oriT count 116


Bacteria

116

Species

Total oriT count 22924


Genus

Total oriT count 22901


Klebsiella

6177

Salmonella

1675

Shigella

406

Rhizobium

281

Serratia

180

Proteus

115

Aeromonas

103

Yersinia

103

Vibrio

89

Xylella

25

Erwinia

15

Pantoea

14

Hafnia

13

Afipia

2

Mixta

1

Nostoc

1

Family

Total oriT count 22899


Superkingdom

Total oriT count 22924


Bacteria

22923

Antibiotic resistance genes carried by oriT-harboring plasmids


Created with Highcharts 11.1.0Chart context menuFolate pathway antagonistFolate pat…Folate pathway antagonistFolate pat…Beta-lactamBeta-lactamAminoglycosideAminoglycosideTetracyclineTet…TetracyclineTet…QuinoloneQ…QuinoloneQ…AmphenicolA…AmphenicolA…qacEqacEsul1sul1ant(3'')-Iaant(3'…ant(3'')-Iaant(3'…aph(3'')-Ibaph(3…aph(3'')-Ibaph(3…aph(6)-Idaph(6…aph(6)-Idaph(6…tet(A)tet(A)sul2sul2floRfloRaadA2aadA2blaTEM-1BblaTE…blaTEM-1BblaTE…

Antibiotic resistance genes carried by oriT-harboring ICEs/IMEs


Created with Highcharts 11.1.0Chart context menuTetracyclineTetracyclineBeta-lactamB…Beta-lactamB…AminoglycosideAminoglycosideAmphenicolAmp…AmphenicolAmp…Folate pathway antagonistFolate pathwa…Folate pathway antagonistFolate pathwa…tet(M)tet(M)erm(B)erm(B)floRfloRaph(6)-Idaph(6)-Idaph(3'')-Ibaph(3'')-…aph(3'')-…sul2sul2dfrA1dfrA1aadA2aadA2qacEqacEsul1sul1

Virulence factor genes carried by oriT-harboring plasmids


Created with Highcharts 11.1.0Chart context menuEffector delivery systemEffe…Effector delivery systemEffe…ExotoxinExotoxinAdherenceAdherenceNutritional/Metabolic factorNutritional/Metabolic…Nutritional/Metabolic factorNutritional/Metabolic…PefPefSpvBSpvBAerobactinAerobactinSalmochelin siderophoreSalmo…Salmochelin siderophoreSalmo…Hsp60Hsp60Alpha-HemolysinAlpha…Alpha-HemolysinAlpha…YersiniabactinYersini…YersiniabactinYersini…TTSSTTSS

Virulence factor genes carried by oriT-harboring ICEs/IMEs


Created with Highcharts 11.1.0Chart context menuNutritional/Metabolic factorNutritional/Metabolic…Nutritional/Metabolic factorNutritional/Metabolic…YersiniabactinYersiniabactin

Metal resistance genes carried by oriT-harboring plasmids


Created with Highcharts 11.1.0Chart context menuTeTeAsAsHgHgAgAgCuCuarsRarsRarsBarsBarsCarsCmerRmerRmerTmerTmerPmerPmerAmerAmerDmerDmerEmerEsilPsilPsilEsilEsilSsilSsilRsilRsilCsilCsilFsilFsilBsilBsilAsilApcoSpcoSpcoRpcoRpcoDpcoDpcoCpcoCpcoBpcoBpcoApcoAterWterWterZterZterAterAterBterBterCterCterDterDterEterE

Metal resistance genes carried by oriT-harboring ICEs/IMEs


Created with Highcharts 11.1.0Chart context menuCuCuHgHgmerRmerRmerPmerPmerAmerAmerR2merR2merTmerTarsCarsCgolTgolTmerEmerEmerDmerD

Degradation genes carried by oriT-harboring plasmids


Created with Highcharts 11.1.0Chart context menuPCNsPCNsDDTDDTα-HCHα-H…α-HCHα-H…PCDD/PCDFPCDD/PC…PCDD/PCDFPCDD/PC…Lindane/α-HCH/β-HCHLind…Lindane/α-HCH/β-HCHLind…PFOA/PFOSP…PFOA/PFOSP…nahAanahAanahAcnahAcnahBnahBnahFnahFnahEnahEnahDnahDnahHnahHnahInahInahNnahNnahLnahLnahOnahOnahMnahMnahKnahKnahJnahJlinJlinJdxnHdxnHbphCbphCLinGLinG

Degradation genes carried by oriT-harboring ICEs/IMEs


Created with Highcharts 11.1.0Chart context menuPCBPCBDDTDDTα-HCHα-HCHPCDD/PCDFPCD…PCDD/PCDFPCD…Lindane/α-HCH/β-HCHLind…Lindane/α-HCH/β-HCHLind…bphA1bphA1bphAbphAdhcdhclinJlinJdxnHdxnHLinGLinG

Symbiosis genes carried by oriT-harboring plasmids


Created with Highcharts 11.1.0Chart context menufixBfixBfixAfixAnodDno…nodDno…nodAn…nodAn…fixNf…fixNf…fixOf…fixOf…nodCn…nodCn…nodIn…nodIn…nodJn…nodJn…fixXfi…fixXfi…fixCfi…fixCfi…nifHn…nifHn…nifDn…nifDn…nifEn…nifEn…

Symbiosis genes carried by oriT-harboring ICEs/IMEs


Created with Highcharts 11.1.0Chart context menu

Anti-CRISPRs carried by oriT-harboring plasmids


Created with Highcharts 11.1.0Chart context menuII-AII-AV-AV-AI-FI-FI-EI-EAcrIIA9AcrIIA9AcrVA2AcrVA2AcrIIA21AcrIIA21AcrIIA7AcrIIA7AcrIF11AcrIF…AcrIF11AcrIF…AcrIE9AcrIE9

Anti-CRISPRs carried by oriT-harboring ICEs/IMEs


Created with Highcharts 11.1.0Chart context menuII-AII-AII-CII-CI-AI-AAcrIIA21AcrIIA21AcrIIA8AcrIIA8AcrIBAcrIBAcrIIC1AcrIIC1AcrIIA7AcrIIA7AcrIIA9AcrIIA9AcrIAAcrIA