TA loci of Salmonella enterica subsp. enterica serovar Dublin strain RM092

Number of TA loci: experimental0; insolico19

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA270805 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS00935 (tacT) PQQ00_RS00930 (tacA) tacAT/DUF1778(antitoxin)
in_silico TA270806 Prophage Prophage Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS01420 (doc) PQQ00_RS01415 (phd) phd-doc/Doc-RelB
in_silico TA270807 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS01625 (yafQ) PQQ00_RS01620 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA270809 GI Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS04040 (vapC) PQQ00_RS04035 (vapB) vapBC/VapC-VagC
in_silico TA270810 IS/Tn Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS04730 (TacT3) PQQ00_RS04735 (TacA3) tacAT/DUF1778(antitoxin)
in_silico TA270815 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS17675 (Hha) PQQ00_RS17670 (TomB) Hha-TomB/-
in_silico TA270818 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS20445 (shpA) PQQ00_RS20440 (shpB) shpAB/BrnT-BrnA
in_silico TA270819 IScluster/Tn GI Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS20680 (ccdB) PQQ00_RS20685 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270820 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS20885 (relE) PQQ00_RS20890 (relB) relBE/ParE-RelB
in_silico TA270821 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS21460 (TacT2) PQQ00_RS21465 (TacA2) tacAT/DUF1778(antitoxin)
in_silico TA270822 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS22800 (higB) PQQ00_RS22795 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA270823 - Salmonella enterica subsp. enterica serovar Dublin strain RM092 (chromosome) NZ_CP117362 PQQ00_RS22810 (higB) PQQ00_RS22815 (higA) higBA (relBE)/HigB-HigA
in_silico TA270824 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM092 (plasmid pRM092_1) NZ_CP117363 PQQ00_RS23850 (higB) PQQ00_RS23845 (higA) higBA (relBE)/COG4683-HTH_37
in_silico TA270825 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM092 (plasmid pRM092_2) NZ_CP117364 PQQ00_RS24350 (vagD) PQQ00_RS24355 (vagC) vagCD/VapC-VagC
in_silico TA270826 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM092 (plasmid pRM092_2) NZ_CP117364 PQQ00_RS24365 (ccdB) PQQ00_RS24360 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270827 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM092 (plasmid pRM092_2) NZ_CP117364 PQQ00_RS24550 (relE) PQQ00_RS24545 (relB) relBE/ParE-DnaT
experimentalExperimentally validated     insolicoBioinformatically predicted