MGE detailed information
MGE type: Prophage MGE length: 18878 bp
Accession: NZ_CP117362 Location: 296812..315689 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM092 Replicon: chromosome
Accession: NZ_CP117362 Location: 296812..315689 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM092 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ00_RS01325 (291922) | 291922..293565 | - | 1644 | WP_000789675.1 | methyl-accepting chemotaxis citrate transducer | - |
| PQQ00_RS01330 (293765) | 293765..295963 | - | 2199 | WP_000106650.1 | Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA | - |
| PQQ00_RS01335 (296044) | 296044..296670 | - | 627 | WP_000964735.1 | lysoplasmalogenase | - |
| PQQ00_RS01340 (296812) | 296812..297183 | + | 372 | WP_000042859.1 | DUF2500 domain-containing protein | - |
| PQQ00_RS01345 (297205) | 297205..297474 | - | 270 | WP_000906757.1 | DUF1145 family protein | - |
| PQQ00_RS01350 (297464) | 297464..298060 | - | 597 | WP_000743277.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase | - |
| PQQ00_RS01355 (298186) | 298186..299661 | + | 1476 | WP_001118687.1 | hypothetical protein | VF |
| PQQ00_RS01360 (299664) | 299664..300332 | + | 669 | WP_000617729.1 | hypothetical protein | VF |
| PQQ00_RS01365 (300325) | 300325..301380 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| PQQ00_RS01370 (301626) | 301626..302480 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| PQQ00_RS01375 (302802) | 302802..303905 | + | 1104 | WP_001839269.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQQ00_RS01380 (303989) | 303989..304123 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQQ00_RS01385 (304101) | 304101..304484 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQQ00_RS01390 (304906) | 304906..306015 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQQ00_RS01395 (306075) | 306075..307001 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQQ00_RS01400 (306998) | 306998..308275 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQQ00_RS01405 (308272) | 308272..309039 | + | 768 | WP_001751764.1 | hypothetical protein | VF |
| PQQ00_RS01410 (309041) | 309041..309754 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQQ00_RS01415 (309885) | 309885..310106 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ00_RS01420 (310103) | 310103..310471 | + | 369 | WP_001575091.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQQ00_RS01425 (310730) | 310730..312046 | + | 1317 | WP_000624752.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQQ00_RS01430 (312151) | 312151..313038 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQQ00_RS01435 (313035) | 313035..313880 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQQ00_RS01440 (313882) | 313882..314952 | + | 1071 | WP_000907846.1 | 4-hydroxythreonine-4-phosphate dehydrogenase | VF |
| PQQ00_RS01445 (314949) | 314949..315689 | + | 741 | WP_000073545.1 | glycerophosphodiester phosphodiesterase | - |
| PQQ00_RS01450 (315686) | 315686..316102 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQQ00_RS01455 (316228) | 316228..317970 | + | 1743 | WP_000805110.1 | gamma-glutamyltransferase | - |
| PQQ00_RS01460 (318015) | 318015..319049 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQQ00_RS01465 (319046) | 319046..320017 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|