MGE detailed information
MGE type: Genomic_island MGE length: 11363 bp
Accession: NZ_CP117362 Location: 833659..845021 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM092 Replicon: chromosome
Accession: NZ_CP117362 Location: 833659..845021 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM092 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ00_RS04000 (829105) | 829105..830203 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQQ00_RS04005 (830213) | 830213..831730 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQQ00_RS04010 (831806) | 831806..832351 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQQ00_RS04015 (832616) | 832616..833374 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQQ00_RS04025 (833659) | 833659..834465 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| PQQ00_RS04030 (834745) | 834745..834996 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| PQQ00_RS04035 (835205) | 835205..835432 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQQ00_RS04040 (835432) | 835432..835830 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQQ00_RS04045 (836639) | 836639..837175 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| PQQ00_RS04050 (837222) | 837222..837854 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQQ00_RS04055 (838573) | 838573..839154 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| PQQ00_RS04060 (839274) | 839274..841763 | + | 2490 | WP_000705504.1 | hypothetical protein | VF |
| PQQ00_RS04065 (841804) | 841804..842547 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| PQQ00_RS04070 (842544) | 842544..843620 | + | 1077 | WP_000141331.1 | hypothetical protein | - |
| PQQ00_RS04075 (843764) | 843764..844276 | + | 513 | WP_000336258.1 | CaiF/GrlA family transcriptional regulator | - |
| PQQ00_RS04080 (844263) | 844263..845021 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQQ00_RS04085 (845231) | 845231..846121 | - | 891 | WP_001747399.1 | nickel/cobalt efflux protein RcnA | - |
| PQQ00_RS04090 (846242) | 846242..846514 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQQ00_RS04095 (846545) | 846545..847774 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PQQ00_RS04100 (847916) | 847916..848371 | - | 456 | WP_001574932.1 | multidrug/biocide efflux PACE transporter | - |
| PQQ00_RS04105 (848475) | 848475..849338 | + | 864 | WP_001270781.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.008 |