MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117362 Location: 4194124..4197227 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM092 Replicon: chromosome
Accession: NZ_CP117362 Location: 4194124..4197227 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM092 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ00_RS20650 (4189413) | 4189413..4189859 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQQ00_RS20655 (4189856) | 4189856..4192300 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQQ00_RS20660 (4192317) | 4192317..4193057 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQQ00_RS20665 (4193179) | 4193179..4193676 | - | 498 | WP_001231942.1 | SEF14 fimbria major subunit SefA | - |
| PQQ00_RS20670 (4194032) | 4194032..4195165 | + | 1134 | Protein_4046 | IS3 family transposase | - |
| PQQ00_RS20675 (4195197) | 4195197..4195337 | - | 141 | Protein_4047 | Arm DNA-binding domain-containing protein | - |
| PQQ00_RS20680 (4195743) | 4195743..4196051 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQQ00_RS20685 (4196054) | 4196054..4196293 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQQ00_RS20690 (4196402) | 4196402..4196650 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQQ00_RS20695 (4196841) | 4196841..4197272 | - | 432 | Protein_4051 | IS630 family transposase ISEc33 | Transposase |
| PQQ00_RS20705 (4198029) | 4198029..4199048 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQQ00_RS20710 (4199076) | 4199076..4199606 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQQ00_RS20715 (4199823) | 4199823..4200854 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQQ00_RS20720 (4200879) | 4200879..4201643 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|