MGE detailed information
MGE type: Genomic_island MGE length: 10023 bp
Accession: NC_013199 Location: 509097..519119 Organism: Lactobacillus rhamnosus Lc 705 Replicon: chromosome
Accession: NC_013199 Location: 509097..519119 Organism: Lactobacillus rhamnosus Lc 705 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC705_RS02370 (LC705_00498) | 504661..505029 | - | 369 | WP_005686376.1 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| LC705_RS02375 (LC705_00499) | 505178..505759 | - | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit L | - |
| LC705_RS02380 (LC705_00500) | 505746..506765 | - | 1020 | WP_005691624.1 | dihydroxyacetone kinase subunit DhaK | - |
| LC705_RS02385 (LC705_00501) | 506958..507386 | - | 429 | WP_005691626.1 | OsmC family protein | - |
| LC705_RS02390 (LC705_00502) | 507916..508605 | + | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| LC705_RS02395 (LC705_00504) | 509097..509705 | - | 609 | WP_005691630.1 | hypothetical protein | - |
| LC705_RS02405 (LC705_00506) | 510152..511027 | + | 876 | WP_024305787.1 | XRE family transcriptional regulator | - |
| LC705_RS02410 (LC705_00507) | 511270..512685 | - | 1416 | WP_005691634.1 | DNA polymerase III subunit epsilon | - |
| LC705_RS14280 (LC705_00508) | 512909..513094 | - | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LC705_RS02415 (LC705_00509) | 513122..513394 | - | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LC705_RS02420 (LC705_00510) | 513956..514204 | + | 249 | WP_005691639.1 | hypothetical protein | - |
| LC705_RS02425 (LC705_00511) | 514447..514740 | + | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LC705_RS02430 (LC705_00512) | 514822..515985 | + | 1164 | WP_005691640.1 | MFS transporter | - |
| LC705_RS02435 (LC705_00513) | 516139..516714 | + | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| LC705_RS02440 (LC705_00514) | 516857..517453 | + | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| LC705_RS02445 (LC705_00515) | 517488..518669 | + | 1182 | WP_014571132.1 | transposase | - |
| LC705_RS02455 (LC705_00516) | 518901..519119 | + | 219 | WP_005691646.1 | hypothetical protein | - |
| LC705_RS02460 (LC705_00517) | 519248..520129 | - | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| LC705_RS02465 (LC705_00518) | 520718..522451 | + | 1734 | WP_005691647.1 | pyruvate oxidase | - |
| LC705_RS02470 (LC705_00519) | 522663..522950 | - | 288 | WP_005691648.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0 | |
| Lactobacillus rhamnosus LOCK908 | Genomic island | TA29676 | NC_021725 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain SCT-10-10-60 | Genomic island | TA72233 | NZ_CP019305 | 517689..528892 | 0.003 | |
| Lacticaseibacillus rhamnosus strain JCM1553 | Genomic island | TA78456 | NZ_CP022109 | 517689..528892 | 0.003 | |
| Lacticaseibacillus rhamnosus strain BIO5326 | Genomic island | TA143788 | NZ_CP046267 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain KF7 | Genomic island | TA186159 | NZ_CP067365 | 528194..539428 | 0.003 | |
| Lacticaseibacillus rhamnosus strain X253 | Genomic island | TA200045 | NZ_CP073711 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain CAU 1365 | Genomic island | TA215714 | NZ_CP082961 | 2643831..2655034 | 0.003 | |
| Lacticaseibacillus rhamnosus strain PMC203 | Genomic island | TA222966 | NZ_CP086326 | 2427363..2438367 | 0.003 | |
| Lacticaseibacillus rhamnosus strain VHProbi Y39 | Genomic island | TA235496 | NZ_CP092033 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain P118 | Genomic island | TA248870 | NZ_CP099396 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain DM065 | Genomic island | TA254067 | NZ_CP102716 | 2430309..2441313 | 0.003 | |
| Lacticaseibacillus rhamnosus strain VSI33 | Genomic island | TA272698 | NZ_CP118035 | 517681..527703 | 0 | |
| Lacticaseibacillus rhamnosus strain VSI43 | Genomic island | TA272725 | NZ_CP118050 | 513060..524263 | 0.003 | |
| Lacticaseibacillus rhamnosus strain VSI43 | Genomic island | TA272725 | NZ_CP118050 | 513060..525273 | 0.005 | |
| Lacticaseibacillus rhamnosus strain A5 | Genomic island | TA275388 | NZ_CP120736 | 325746..336953 | 0.003 | |
| Lacticaseibacillus rhamnosus strain NCTC13710 | Genomic island | TA287676 | NZ_LR134322 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain NCTC13764 | Genomic island | TA287704 | NZ_LR134331 | 518870..528892 | 0 | |
| Lacticaseibacillus rhamnosus strain BPL5 | Genomic island | TA293114 | NZ_LT220504 | 1739484..1750488 | 0.004 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0 |