Vibrio fluvialis
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS01028 | i1 | Vibrio fluvialis 85003 | chromosome (KY319183) | 2525..21696 | anti-bacterial |
| T6SS01029 | i5 | Vibrio fluvialis 85003 | chromosome (KY319184) | 1341..24915 | anti-bacterial |
| T6SS01237 | Unknown | Vibrio fluvialis VF42 | chromosome (-) | - | - |
| T6SS01238 | Unknown | Vibrio fluvialis CICC21612 | chromosome (-) | - | - |
| T6SS01239 | Unknown | Vibrio fluvialis VF54 | chromosome (-) | - | - |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0373 |
hapR | T6SS01028 ; T6SS01029 |
protein | QS regulatory pathway | Vibrio fluvialis 85003 | chromosome (KY319184) | - | - | vgrG (↓) |
| REG0374 |
ihfA | T6SS01028 ; T6SS01029 |
protein | QS regulatory pathway | Vibrio fluvialis 85003 | chromosome (KY319184) | - | - | vgrG (↓) |
| REG0375 |
ihfB | T6SS01028 ; T6SS01029 |
protein | QS regulatory pathway | Vibrio fluvialis 85003 | chromosome (KY319184) | - | - | vgrG (↓) |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|---|---|---|---|---|---|---|---|
| EFF18629 |
tssD2_a | - | IMU17309 |
T6SS01028 |
Vibrio fluvialis strain 85003 | chromosome (KY319185) | 1820..2338 (+) | ARK19412.1 |
| EFF18630 |
tssD2_b | - | IMU17310 |
T6SS01028 |
Vibrio fluvialis strain 85003 | chromosome (KY319186) | 2484..3002 (+) | ARK19415.1 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| IMU17309 |
tssI2_a | T6SS01028 |
Vibrio fluvialis strain 85003 | chromosome (KY319185) | 2490..4556 (+) | ARK19413.1 | EFF18629 |
| IMU17310 |
tssI2_b | T6SS01028 |
Vibrio fluvialis strain 85003 | chromosome (KY319186) | 3154..5250 (+) | ARK19416.1 | EFF18630 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
|---|
Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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