Vibrio cholerae O395
Experimental investigation has been performed.
Bioinformatics investigation has been performed
T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
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REG0181 | VC0395_0020/VCA0117 (bEBP/vasH) | T6SS00208 | protein | Global regulator | Vibrio cholerae O395 | chromosome (NC_009456) | 22315..23907 (-) | 446006938 | T6SS gene cluster promoter (PVCA0107/VC0395_RS00160) (↓) |
REG0180 | VC0395_RS17530 (TsrA) | T6SS00208 ; T6SS00487 | protein | Global regulator | Vibrio cholerae O395 | chromosome (NC_009457) | 2598392..2598676 (-) | 445982516 | T6SS Transciption (↑) |
REG0182 | VC0395_A2109 (rpoN) | T6SS00208 | protein | Global regulator | Vibrio cholerae O395 | chromosome (NC_009457) | 2265078..2266541 (+) | 446727517 | T6SS gene cluster promoter (PVCA0107/VC0395_RS00160) (↓); hcp promoter (PVCA0017/VC0395_0116) (↓) |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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