Serratia marcescens strain RM66262
Experimental investigation has been performed.
Bioinformatics investigation has been performed
T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
---|---|---|---|---|---|
T6SS01264 | i3 | Serratia marcescens RM66262 | chromosome (NZ_JWLO01000001) | 563798..601203 | anti-bacterial |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
---|---|---|---|---|---|---|---|---|---|
REG0005 | RT90_16255 (wecG) | T6SS01264 | protein | TCS regulatory pathway | Serratia marcescens strain RM66262 | chromosome (JWLO01000003) | 92056..92796 (-) | 735005313 | RT90_01105 (rcsC) (↑) |
REG0003 | RT90_01105 (rcsC) | T6SS01264 | protein | TCS-HK | Serratia marcescens strain RM66262 | chromosome (JWLO01000001) | 232638..235499 (+) | 735006326 | RT90_01115 (rcsB) (↑) |
REG0004 | RT90_01115 (rcsB) | T6SS01264 | protein | TCS-RR | Serratia marcescens strain RM66262 | chromosome (JWLO01000001) | 235561..236211 (-) | 735006328 | vgrG promoter (↓) |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
---|
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
---|
Experimental investigation has been performed.
Bioinformatics investigation has been performed
ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
---|
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
---|