Pseudomonas syringae pv. tomato str. DC3000
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T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS00042 | i1 | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 6149242..6189243 | anti-eukaryotic; anti-bacterial; effector translocation; virulence |
| T6SS00041 | i1 | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 2796816..2829435 | - |
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Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0096 | PSPTO_RS08845 (relA) | T6SS00041 ; T6SS00042 | protein | (p)ppGpp regulatory pathway | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 1863879..1866122 (+) | 494457621 | T6SS transcripts (↓) |
| REG0097 | PSPTO_RS00410 (spoT) | T6SS00041 ; T6SS00042 | protein | (p)ppGpp regulatory pathway | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 94805..96910 (-) | 492171753 | T6SS transcripts (↓) |
| REG0098 | PSPTO_RS04545 (fpRel) | T6SS00041 ; T6SS00042 | protein | (p)ppGpp regulatory pathway | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 927082..927900 (+) | 499415849 | T6SS transcripts (↓) |
| REG0099 | PSPTO_RS28060 (Sfa) | T6SS00041 ; T6SS00042 | protein | Global regulator | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 6165047..6166564 (-) | 499418021 | T6SS transcripts (↓) |
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Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|---|---|---|---|---|---|---|---|
| EFF00059 | PSPTO_RS28130 | - | - | T6SS00042 | Pseudomonas syringae pv. tomato str. DC3000 | chromosome (NC_004578) | 6181106..6181624 (+) | 28872543 |
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Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
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ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Experimental investigation has been performed. Bioinformatics investigation has been performed
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Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
|---|---|---|---|---|---|---|---|---|---|
| No matching records found | |||||||||