Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ABC803_RS02125 | Genome accession | NZ_CP155531 |
| Coordinates | 383979..384374 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282442.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain SN36255 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 378979..389374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC803_RS02075 (ABC803_02075) | - | 379061..379423 (+) | 363 | WP_000078804.1 | DUF2200 family protein | - |
| ABC803_RS02080 (ABC803_02080) | - | 379420..379923 (+) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| ABC803_RS02085 (ABC803_02085) | - | 380037..380483 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| ABC803_RS02090 (ABC803_02090) | - | 380488..381162 (+) | 675 | WP_000725707.1 | hypothetical protein | - |
| ABC803_RS02095 (ABC803_02095) | - | 381405..381602 (+) | 198 | Protein_384 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| ABC803_RS02100 (ABC803_02100) | - | 381627..381758 (-) | 132 | WP_001811306.1 | hypothetical protein | - |
| ABC803_RS02105 (ABC803_02105) | - | 381852..382151 (+) | 300 | WP_001815024.1 | DUF4651 domain-containing protein | - |
| ABC803_RS02110 (ABC803_02110) | - | 382148..382465 (+) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| ABC803_RS02115 (ABC803_02115) | ytpR | 382481..383107 (+) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| ABC803_RS02120 (ABC803_02120) | - | 383140..383901 (+) | 762 | WP_001107762.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ABC803_RS02125 (ABC803_02125) | ssbB/cilA | 383979..384374 (+) | 396 | WP_000282442.1 | single-stranded DNA-binding protein | Machinery gene |
| ABC803_RS02130 (ABC803_02130) | groES | 384530..384814 (+) | 285 | WP_000917339.1 | co-chaperone GroES | - |
| ABC803_RS02135 (ABC803_02135) | groL | 384830..386452 (+) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| ABC803_RS02140 (ABC803_02140) | - | 386590..387345 (+) | 756 | Protein_393 | epoxyqueuosine reductase QueH | - |
| ABC803_RS02145 (ABC803_02145) | - | 387793..388566 (+) | 774 | WP_000566040.1 | class I SAM-dependent methyltransferase | - |
| ABC803_RS02150 (ABC803_02150) | - | 388579..388911 (+) | 333 | WP_001810556.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14907.85 Da Isoelectric Point: 5.9409
>NTDB_id=997021 ABC803_RS02125 WP_000282442.1 383979..384374(+) (ssbB/cilA) [Streptococcus pneumoniae strain SN36255]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=997021 ABC803_RS02125 WP_000282442.1 383979..384374(+) (ssbB/cilA) [Streptococcus pneumoniae strain SN36255]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
97.71 |
100 |
0.977 |
| ssbA | Streptococcus mutans UA159 |
75.573 |
100 |
0.756 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.992 |
100 |
0.71 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.714 |
85.496 |
0.519 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.887 |
80.916 |
0.42 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
47.788 |
86.26 |
0.412 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
44.444 |
82.443 |
0.366 |