Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | AAVB50_RS03245 | Genome accession | NZ_CP154923 |
| Coordinates | 583873..584214 (+) | Length | 113 a.a. |
| NCBI ID | WP_014478203.1 | Uniprot ID | A0A0C3GLH9 |
| Organism | Bacillus subtilis strain FUA2233 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 578873..589214
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVB50_RS03230 (AAVB50_03230) | - | 582050..582688 (+) | 639 | WP_015251045.1 | class A sortase | - |
| AAVB50_RS03235 (AAVB50_03235) | ywpF | 582828..583238 (-) | 411 | WP_015251046.1 | YwpF-like family protein | - |
| AAVB50_RS03240 (AAVB50_03240) | ywpG | 583413..583796 (+) | 384 | WP_014478204.1 | DynA interaction protein YwpG | - |
| AAVB50_RS03245 (AAVB50_03245) | ssbB | 583873..584214 (+) | 342 | WP_014478203.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| AAVB50_RS03250 (AAVB50_03250) | glcR | 584439..585215 (+) | 777 | WP_003244075.1 | transcriptional regulator GlcR | - |
| AAVB50_RS03255 (AAVB50_03255) | ywpJ | 585221..586078 (+) | 858 | WP_217011556.1 | phosphatase YwpJ | - |
| AAVB50_RS03260 (AAVB50_03260) | hepA | 586204..588972 (-) | 2769 | WP_029726036.1 | DEAD/DEAH box helicase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12462.11 Da Isoelectric Point: 7.8150
>NTDB_id=995508 AAVB50_RS03245 WP_014478203.1 583873..584214(+) (ssbB) [Bacillus subtilis strain FUA2233]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=995508 AAVB50_RS03245 WP_014478203.1 583873..584214(+) (ssbB) [Bacillus subtilis strain FUA2233]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
99.115 |
100 |
0.991 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |