Detailed information NTG0099097

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: SP4011_RS01915
• Genome accession: NZ_AP026968
• Coordinates: 353160..353555 (+)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus parapneumoniae strain SP4011
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 348160..358555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP4011_RS01885 (SP4011_03340)	-	349869..350372 (+)	504	WP_338619613.1	phosphatase PAP2 family protein	-
SP4011_RS01890 (SP4011_03350)	-	350635..350832 (+)	198	Protein_340	N-acetylmuramoyl-L-alanine amidase family protein	-
SP4011_RS01895 (SP4011_03360)	-	351024..351323 (+)	300	WP_261045464.1	DUF4651 domain-containing protein	-
SP4011_RS01900 (SP4011_03370)	-	351320..351637 (+)	318	WP_261045465.1	thioredoxin family protein	-
SP4011_RS01905 (SP4011_03380)	ytpR	351653..352279 (+)	627	WP_338619617.1	YtpR family tRNA-binding protein	-
SP4011_RS01910 (SP4011_03390)	-	352321..353082 (+)	762	WP_262081327.1	SDR family NAD(P)-dependent oxidoreductase	-
SP4011_RS01915 (SP4011_03400)	ssbB/cilA	353160..353555 (+)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
SP4011_RS01920 (SP4011_03410)	-	353643..354608 (+)	966	WP_338619622.1	substrate-binding domain-containing protein	-
SP4011_RS01925 (SP4011_03420)	-	354608..355945 (+)	1338	WP_261030302.1	sensor histidine kinase	-
SP4011_RS01930 (SP4011_03430)	-	355920..356603 (+)	684	WP_078237995.1	response regulator transcription factor	-
SP4011_RS01935 (SP4011_03440)	-	356600..357892 (+)	1293	WP_338619625.1	ABC transporter substrate-binding protein	-
SP4011_RS01940 (SP4011_03450)	-	358052..358489 (+)	438	WP_020903145.1	PTS sugar transporter subunit IIA	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=99097 SP4011_RS01915 WP_000282442.1 353160..353555(+) (ssbB/cilA) [Streptococcus parapneumoniae strain SP4011]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=99097 SP4011_RS01915 WP_000282442.1 353160..353555(+) (ssbB/cilA) [Streptococcus parapneumoniae strain SP4011]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCATAAAACCAACAATGACAAGTCAGTAGC
GCGTGCAACTATCGCTGTGAATCGTCGATACAAAGACCAAAATGGCGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTTATTTCCGTTGATGGGGAATTGCGTACCCGT
CGTTTTGAGAAAAATGGTCAAATGAATTATGTGACCGAAGTCCTCGTCACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGAGAAAATAACGCTGGGCAGGATTTGGCAGATTTGGTTTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366