Detailed information NTG0099080

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SP4011_RS01270
• Genome accession: NZ_AP026968
• Coordinates: 226296..226730 (+)
• Length: 144 a.a.
• NCBI ID: WP_044012294.1
• Uniprot ID: -
• Organism: Streptococcus parapneumoniae strain SP4011
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 221296..231730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP4011_RS01245 (SP4011_02220)	-	222451..223509 (+)	1059	WP_084886478.1	zinc-dependent alcohol dehydrogenase family protein	-
SP4011_RS01250 (SP4011_02230)	-	223660..224025 (+)	366	WP_338619535.1	DUF1033 family protein	-
SP4011_RS01255 (SP4011_02240)	comGA/cglA/cilD	224103..225044 (+)	942	WP_338619537.1	competence type IV pilus ATPase ComGA	Machinery gene
SP4011_RS01260 (SP4011_02250)	comGB/cglB	224992..226008 (+)	1017	WP_338620380.1	competence type IV pilus assembly protein ComGB	Machinery gene
SP4011_RS01265 (SP4011_02260)	comGC/cglC	226010..226333 (+)	324	WP_338619538.1	competence type IV pilus major pilin ComGC	Machinery gene
SP4011_RS01270 (SP4011_02270)	comGD/cglD	226296..226730 (+)	435	WP_044012294.1	competence type IV pilus minor pilin ComGD	Machinery gene
SP4011_RS01275 (SP4011_02280)	comGE/cglE	226693..226995 (+)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
SP4011_RS01280 (SP4011_02290)	comGF/cglF	226958..227419 (+)	462	WP_000250511.1	competence type IV pilus minor pilin ComGF	Machinery gene
SP4011_RS01285 (SP4011_02300)	comGG/cglG	227397..227810 (+)	414	WP_000265635.1	competence type IV pilus minor pilin ComGG	Machinery gene
SP4011_RS01290 (SP4011_02310)	-	228272..229114 (-)	843	WP_000840058.1	helix-turn-helix domain-containing protein	-
SP4011_RS01295 (SP4011_02320)	-	229311..229787 (-)	477	WP_000777684.1	GNAT family N-acetyltransferase	-
SP4011_RS01300 (SP4011_02330)	-	229900..231102 (-)	1203	WP_000855226.1	ATP-grasp domain-containing protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15874.32 Da
• Isoelectric Point: 10.5548

>NTDB_id=99080 SP4011_RS01270 WP_044012294.1 226296..226730(+) (comGD/cglD) [Streptococcus parapneumoniae strain SP4011]
MQNKIRLKPLQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQSPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=99080 SP4011_RS01270 WP_044012294.1 226296..226730(+) (comGD/cglD) [Streptococcus parapneumoniae strain SP4011]
ATGCAAAACAAAATAAGACTCAAACCGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGCCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCAGGCTCTGTCCAGTCTACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACG
ATTAGCAATGGCAGTCAAAAGTTGACAGTCCCTAAAGGGATTCAGTCACCATCGGGACAAAGTATTACATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	95.833	100	0.958
comGD/cglD	Streptococcus pneumoniae Rx1	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae D39	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae R6	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae TIGR4	96.992	92.361	0.896
comYD	Streptococcus gordonii str. Challis substr. CH1	57.463	93.056	0.535
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444