Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH31_RS11330 | Genome accession | NZ_CP152041 |
| Coordinates | 2220791..2221126 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-1033 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2215791..2226126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH31_RS11310 (MHH31_11310) | gcvT | 2216268..2217365 (-) | 1098 | WP_342494813.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH31_RS11315 (MHH31_11315) | - | 2217927..2219597 (+) | 1671 | WP_342494814.1 | SNF2-related protein | - |
| MHH31_RS11320 (MHH31_11320) | - | 2219612..2220409 (+) | 798 | WP_342494815.1 | YqhG family protein | - |
| MHH31_RS11325 (MHH31_11325) | - | 2220593..2220757 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| MHH31_RS11330 (MHH31_11330) | sinR | 2220791..2221126 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| MHH31_RS11335 (MHH31_11335) | - | 2221194..2221994 (-) | 801 | WP_008342195.1 | TasA family protein | - |
| MHH31_RS11340 (MHH31_11340) | - | 2222053..2222625 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| MHH31_RS11345 (MHH31_11345) | tapA | 2222675..2223202 (-) | 528 | WP_056705241.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH31_RS11350 (MHH31_11350) | - | 2223455..2223781 (+) | 327 | WP_058336653.1 | DUF3889 domain-containing protein | - |
| MHH31_RS11355 (MHH31_11355) | - | 2223816..2224010 (-) | 195 | WP_024718846.1 | YqzE family protein | - |
| MHH31_RS11360 (MHH31_11360) | comGG | 2224071..2224454 (-) | 384 | WP_342494816.1 | competence type IV pilus minor pilin ComGG | - |
| MHH31_RS11365 (MHH31_11365) | comGF | 2224451..2224948 (-) | 498 | WP_216894677.1 | competence type IV pilus minor pilin ComGF | - |
| MHH31_RS11370 (MHH31_11370) | comGE | 2224890..2225204 (-) | 315 | WP_039166034.1 | competence type IV pilus minor pilin ComGE | - |
| MHH31_RS11375 (MHH31_11375) | comGD | 2225188..2225634 (-) | 447 | WP_096881621.1 | competence type IV pilus minor pilin ComGD | - |
| MHH31_RS11380 (MHH31_11380) | comGC | 2225627..2225920 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=986430 MHH31_RS11330 WP_017357978.1 2220791..2221126(+) (sinR) [Bacillus sp. FSL K6-1033]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986430 MHH31_RS11330 WP_017357978.1 2220791..2221126(+) (sinR) [Bacillus sp. FSL K6-1033]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |