Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHH31_RS11135 Genome accession   NZ_CP152041
Coordinates   2185673..2186476 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL K6-1033     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2180673..2191476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH31_RS11120 (MHH31_11120) - 2182889..2183125 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  MHH31_RS11125 (MHH31_11125) - 2183159..2183896 (-) 738 WP_024718886.1 glycerophosphodiester phosphodiesterase -
  MHH31_RS11130 (MHH31_11130) - 2184123..2185223 (-) 1101 WP_024718885.1 Rap family tetratricopeptide repeat protein -
  MHH31_RS11135 (MHH31_11135) spo0A 2185673..2186476 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  MHH31_RS11140 (MHH31_11140) spoIVB 2186759..2188036 (-) 1278 WP_342494811.1 SpoIVB peptidase -
  MHH31_RS11145 (MHH31_11145) recN 2188235..2189968 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  MHH31_RS11150 (MHH31_11150) argR 2190003..2190452 (-) 450 WP_007501163.1 transcriptional regulator ArgR -
  MHH31_RS11155 (MHH31_11155) - 2190614..2191468 (-) 855 WP_007501164.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=986428 MHH31_RS11135 WP_008342226.1 2185673..2186476(-) (spo0A) [Bacillus sp. FSL K6-1033]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=986428 MHH31_RS11135 WP_008342226.1 2185673..2186476(-) (spo0A) [Bacillus sp. FSL K6-1033]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCTATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment