Detailed information NTG0098539

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8611_RS09585
• Genome accession: NZ_AP026927
• Coordinates: 1868054..1868458 (-)
• Length: 134 a.a.
• NCBI ID: WP_050199843.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700178
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1863054..1873458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8611_RS09545 (PC0174_18600)	rnpA	1863468..1863839 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R8611_RS09550	-	1863856..1863987 (-)	132	WP_000768904.1	hypothetical protein	-
R8611_RS09555 (PC0174_18610)	-	1863988..1865178 (-)	1191	WP_317647937.1	acetate kinase	-
R8611_RS09560 (PC0174_18620)	comYH	1865229..1866182 (-)	954	WP_050199846.1	class I SAM-dependent methyltransferase	Machinery gene
R8611_RS09565	-	1866243..1866837 (-)	595	Protein_1865	class I SAM-dependent methyltransferase	-
R8611_RS09570 (PC0174_18650)	comGG/cglG	1866974..1867387 (-)	414	WP_000265631.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8611_RS09575 (PC0174_18660)	comGF/cglF	1867365..1867826 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8611_RS09580 (PC0174_18670)	comGE/cglE	1867789..1868091 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8611_RS09585 (PC0174_18680)	comGD/cglD	1868054..1868458 (-)	405	WP_050199843.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8611_RS09590 (PC0174_18690)	comGC/cglC	1868451..1868777 (-)	327	WP_317647938.1	comG operon protein ComGC	Machinery gene
R8611_RS09595 (PC0174_18700)	comGB/cglB	1868779..1869795 (-)	1017	WP_317648071.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8611_RS09600 (PC0174_18710)	comGA/cglA/cilD	1869743..1870684 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
R8611_RS09605 (PC0174_18720)	-	1870760..1871125 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8611_RS09610 (PC0174_18730)	-	1871276..1872334 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14676.91 Da
• Isoelectric Point: 10.2164

>NTDB_id=98539 R8611_RS09585 WP_050199843.1 1868054..1868458(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700178]
MIKAFTMLESLLVLGLVSILALGLSGSLQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQVPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=98539 R8611_RS09585 WP_050199843.1 1868054..1868458(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700178]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TCTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAATTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGTCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478
comGD	Lactococcus lactis subsp. cremoris KW2	36.842	99.254	0.366