Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | AADH33_RS11465 | Genome accession | NZ_CP151283 |
| Coordinates | 2775739..2776164 (-) | Length | 141 a.a. |
| NCBI ID | WP_348548952.1 | Uniprot ID | A0AAU6RZC2 |
| Organism | Psychrobacter sp. KFRI-CH2-11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2770739..2781164
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AADH33_RS11450 (AADH33_11440) | mutS | 2771370..2774411 (+) | 3042 | WP_348549988.1 | DNA mismatch repair protein MutS | - |
| AADH33_RS11455 (AADH33_11445) | fdxA | 2774616..2774939 (+) | 324 | WP_011279554.1 | ferredoxin FdxA | - |
| AADH33_RS11460 (AADH33_11450) | - | 2775030..2775500 (-) | 471 | WP_348548951.1 | pilin | - |
| AADH33_RS11465 (AADH33_11455) | pilA/pilAI | 2775739..2776164 (-) | 426 | WP_348548952.1 | pilin | Machinery gene |
| AADH33_RS11470 (AADH33_11460) | - | 2776478..2776924 (-) | 447 | WP_348548953.1 | type IV pilin protein | - |
| AADH33_RS11475 (AADH33_11465) | - | 2776924..2777511 (-) | 588 | WP_348548954.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 14179.13 Da Isoelectric Point: 4.1954
>NTDB_id=976082 AADH33_RS11465 WP_348548952.1 2775739..2776164(-) (pilA/pilAI) [Psychrobacter sp. KFRI-CH2-11]
MNAQKGFTLIELMIVVAIIGILAAVAIPAYQNYIAKSQVSVGLADITAGKVNTESQLAEGISAAITTPAEIGLAADTSAC
SGITAAVATDGESTIECTLQGASQITGETITWSRTADTAGTPGVWTCASTVDGKVKPKTCS
MNAQKGFTLIELMIVVAIIGILAAVAIPAYQNYIAKSQVSVGLADITAGKVNTESQLAEGISAAITTPAEIGLAADTSAC
SGITAAVATDGESTIECTLQGASQITGETITWSRTADTAGTPGVWTCASTVDGKVKPKTCS
Nucleotide
Download Length: 426 bp
>NTDB_id=976082 AADH33_RS11465 WP_348548952.1 2775739..2776164(-) (pilA/pilAI) [Psychrobacter sp. KFRI-CH2-11]
ATGAACGCTCAAAAAGGTTTTACCCTAATCGAACTAATGATCGTGGTTGCTATCATCGGTATTCTAGCCGCAGTTGCTAT
TCCTGCGTATCAAAACTATATTGCTAAATCACAGGTATCTGTCGGATTAGCTGATATAACTGCTGGTAAAGTGAATACTG
AGTCACAACTGGCCGAAGGCATAAGTGCTGCTATTACAACTCCAGCCGAGATTGGTTTAGCTGCTGACACATCAGCCTGT
TCTGGCATTACTGCAGCTGTTGCTACAGATGGTGAGTCAACAATTGAGTGTACCTTACAAGGGGCTTCACAAATTACAGG
TGAGACTATTACATGGTCTCGCACTGCCGATACTGCAGGTACTCCTGGGGTATGGACATGTGCTTCAACTGTGGACGGTA
AGGTAAAACCTAAAACTTGCTCTTAA
ATGAACGCTCAAAAAGGTTTTACCCTAATCGAACTAATGATCGTGGTTGCTATCATCGGTATTCTAGCCGCAGTTGCTAT
TCCTGCGTATCAAAACTATATTGCTAAATCACAGGTATCTGTCGGATTAGCTGATATAACTGCTGGTAAAGTGAATACTG
AGTCACAACTGGCCGAAGGCATAAGTGCTGCTATTACAACTCCAGCCGAGATTGGTTTAGCTGCTGACACATCAGCCTGT
TCTGGCATTACTGCAGCTGTTGCTACAGATGGTGAGTCAACAATTGAGTGTACCTTACAAGGGGCTTCACAAATTACAGG
TGAGACTATTACATGGTCTCGCACTGCCGATACTGCAGGTACTCCTGGGGTATGGACATGTGCTTCAACTGTGGACGGTA
AGGTAAAACCTAAAACTTGCTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
51.408 |
100 |
0.518 |
| pilA | Acinetobacter baumannii strain A118 |
50 |
100 |
0.511 |
| pilA | Pseudomonas aeruginosa PAK |
43.791 |
100 |
0.475 |
| pilA | Vibrio cholerae C6706 |
42.857 |
100 |
0.447 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.857 |
100 |
0.447 |
| pilA | Vibrio cholerae strain A1552 |
42.857 |
100 |
0.447 |
| comP | Acinetobacter baylyi ADP1 |
41.06 |
100 |
0.44 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
44.286 |
99.291 |
0.44 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.69 |
100 |
0.418 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
43.704 |
95.745 |
0.418 |
| pilA2 | Legionella pneumophila str. Paris |
40.972 |
100 |
0.418 |