Detailed information NTG0097598

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8775_RS09720
• Genome accession: NZ_AP026915
• Coordinates: 1852867..1853271 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700005
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1847867..1858271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8775_RS09680 (PC0005_18790)	rnpA	1848281..1848652 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R8775_RS09685	-	1848669..1848800 (-)	132	WP_000768904.1	hypothetical protein	-
R8775_RS09690 (PC0005_18800)	-	1848801..1849991 (-)	1191	WP_050233485.1	acetate kinase	-
R8775_RS09695 (PC0005_18810)	comYH	1850042..1850995 (-)	954	WP_050233486.1	class I SAM-dependent methyltransferase	Machinery gene
R8775_RS09700	-	1851056..1851650 (-)	595	Protein_1889	class I SAM-dependent methyltransferase	-
R8775_RS09705 (PC0005_18840)	comGG/cglG	1851787..1852200 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8775_RS09710	comGF/cglF	1852178..1852639 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8775_RS09715 (PC0005_18860)	comGE/cglE	1852602..1852904 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8775_RS09720 (PC0005_18870)	comGD/cglD	1852867..1853271 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8775_RS09725 (PC0005_18880)	comGC/cglC	1853264..1853590 (-)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
R8775_RS09730 (PC0005_18890)	comGB/cglB	1853592..1854608 (-)	1017	WP_078134945.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8775_RS09735 (PC0005_18900)	comGA/cglA/cilD	1854556..1855497 (-)	942	WP_000249569.1	competence type IV pilus ATPase ComGA	Machinery gene
R8775_RS09740 (PC0005_18910)	-	1855573..1855938 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8775_RS09745 (PC0005_18920)	-	1856089..1857147 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=97598 R8775_RS09720 WP_000588013.1 1852867..1853271(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700005]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=97598 R8775_RS09720 WP_000588013.1 1852867..1853271(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700005]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47