Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACJX2R_RS29175 Genome accession   NZ_CP178360
Coordinates   6949299..6951257 (+) Length   652 a.a.
NCBI ID   WP_413102573.1    Uniprot ID   -
Organism   Streptomyces sp. Inha503     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6944299..6956257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJX2R_RS29150 (ACJX2R_29225) - 6944696..6944776 (-) 81 WP_351229977.1 Ms5788A family Cys-rich leader peptide -
  ACJX2R_RS29155 (ACJX2R_29230) - 6944988..6945674 (-) 687 WP_413102570.1 DUF2993 domain-containing protein -
  ACJX2R_RS29160 (ACJX2R_29235) - 6945760..6947151 (-) 1392 WP_413102571.1 hypothetical protein -
  ACJX2R_RS29165 (ACJX2R_29240) - 6947163..6947438 (-) 276 WP_262704462.1 MoaD/ThiS family protein -
  ACJX2R_RS29170 (ACJX2R_29245) rcrP 6947560..6949302 (+) 1743 WP_413102572.1 ABC transporter ATP-binding protein Regulator
  ACJX2R_RS29175 (ACJX2R_29250) rcrQ 6949299..6951257 (+) 1959 WP_413102573.1 ABC transporter ATP-binding protein Regulator
  ACJX2R_RS29180 (ACJX2R_29255) - 6951278..6952129 (-) 852 WP_413102574.1 alpha/beta hydrolase -
  ACJX2R_RS29185 (ACJX2R_29260) - 6952385..6953227 (+) 843 WP_413102575.1 winged helix-turn-helix transcriptional regulator -
  ACJX2R_RS29190 (ACJX2R_29265) - 6953251..6954273 (+) 1023 WP_262704458.1 LacI family DNA-binding transcriptional regulator -
  ACJX2R_RS29195 (ACJX2R_29270) - 6954418..6955539 (+) 1122 WP_262704457.1 S1C family serine protease -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 70154.63 Da        Isoelectric Point: 6.2116

>NTDB_id=971433 ACJX2R_RS29175 WP_413102573.1 6949299..6951257(+) (rcrQ) [Streptomyces sp. Inha503]
MSGTSAPRRGPAPAAGPGRFMGGQPTERSMDFRGSGRRLLVRLRPERGIVLLVLALGTVSTGLAVVGPKILGAATDLIFA
GIVGRQLPDGVSKEQAVQSLRDKGQGTVADMVASMDVTPGQGIDFHAVGVVLLWVTALYVAAALLGLVQGRVATVVVQRA
VFRLREDVEHKLARLPLAYFDKQSRGEVLSRATNDIDNIQQTLQQTLSQIMASLLTIVGVLSMMFWISPLLALVALITVP
VSVWVTTRIGKRAQPQFIAQWKTTGKLNAHIEEMYTGHALVKVFGREKESAQAFREQNDELYGAGFRAQFISGLIQPSMM
FIGNLNYVLVAVVGGLRVASGALSIGDVQAFVQYSRQFSQPLTQVASMANMVQSGVASAERVFELLDAPEQSAEPVDARR
PEAVRGQVAFEEVSFRYQPDTPLIEGLSLSVRPGQTVAIVGPTGAGKTTLVNLLMRFYEVSGGRITLDGVDIAEMTREEL
RSHIGMVLQDTWLFGGTIAENIAYGAEGASPERIVAAAKATYVDRFVRMLPDGYDTVIDEEGSNVSAGEKQLITIARAFL
SEPSILVLDEATSSVDTRTEVLIQRAMASLRSGRTSFVIAHRLSTIRDADVILVMESGRIVEQGSHDALLAAGGAYARLY
ASQFAEPVAETE

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=971433 ACJX2R_RS29175 WP_413102573.1 6949299..6951257(+) (rcrQ) [Streptomyces sp. Inha503]
ATGAGCGGCACTTCGGCGCCCCGCAGGGGGCCGGCGCCCGCCGCCGGGCCCGGCCGCTTCATGGGCGGGCAGCCCACCGA
GCGGTCCATGGACTTCCGCGGCTCCGGCCGCCGGCTGCTGGTCCGGCTCCGCCCCGAGCGCGGGATCGTGCTGCTGGTGC
TCGCGCTGGGCACGGTCAGCACCGGGCTCGCGGTGGTGGGCCCGAAGATCCTCGGTGCGGCCACCGACCTGATCTTCGCG
GGCATCGTCGGACGGCAGCTGCCCGACGGCGTGAGCAAGGAGCAGGCCGTCCAGTCGCTGCGCGACAAGGGCCAGGGCAC
GGTCGCCGACATGGTCGCCTCGATGGACGTCACCCCGGGCCAGGGCATCGACTTCCACGCGGTCGGCGTCGTGCTGCTGT
GGGTCACGGCGCTGTATGTGGCCGCCGCGCTCCTGGGCCTGGTCCAGGGCCGGGTGGCGACCGTCGTCGTCCAGCGCGCG
GTCTTCCGGCTGCGCGAGGACGTGGAGCACAAGCTGGCGCGGCTGCCGCTGGCGTACTTCGACAAGCAGTCGCGCGGCGA
GGTGCTCTCCCGCGCCACCAACGACATCGACAACATCCAGCAGACGCTCCAGCAGACCCTCAGCCAGATCATGGCCTCGC
TGCTGACGATCGTGGGCGTGCTGTCGATGATGTTCTGGATCTCGCCGCTGCTGGCTCTGGTGGCGCTGATCACCGTCCCG
GTCTCGGTGTGGGTGACGACACGCATCGGCAAACGCGCGCAGCCGCAGTTCATCGCCCAGTGGAAGACCACGGGCAAGCT
CAACGCCCATATCGAGGAGATGTACACCGGCCATGCGCTGGTGAAGGTCTTCGGGCGGGAGAAGGAGTCCGCGCAGGCGT
TCCGCGAGCAGAACGACGAGCTCTACGGGGCGGGCTTCCGGGCCCAGTTCATCTCCGGTCTGATCCAGCCGTCGATGATG
TTCATCGGGAACCTCAACTATGTGCTGGTGGCCGTGGTCGGCGGGCTCCGGGTGGCCTCCGGCGCGCTGTCGATCGGCGA
TGTCCAGGCGTTCGTCCAGTACTCCCGGCAGTTCAGCCAGCCGCTCACCCAGGTGGCCTCCATGGCCAACATGGTGCAGT
CGGGCGTGGCCTCCGCCGAGCGGGTCTTCGAGCTGCTGGACGCGCCGGAGCAGAGCGCGGAGCCGGTGGACGCGCGGCGG
CCGGAGGCGGTGCGCGGGCAGGTCGCGTTCGAGGAGGTCTCCTTCCGCTACCAGCCGGACACGCCGCTCATCGAGGGTCT
TTCGCTGTCGGTGCGGCCGGGCCAGACCGTGGCCATCGTCGGGCCGACCGGTGCCGGGAAGACCACGCTGGTCAATCTGC
TGATGCGGTTCTACGAGGTCAGCGGCGGGCGGATCACACTGGACGGGGTGGACATCGCCGAGATGACACGGGAGGAGCTG
CGCTCCCACATCGGGATGGTGCTCCAGGACACCTGGCTGTTCGGCGGGACGATCGCCGAGAACATCGCGTACGGGGCGGA
GGGGGCGAGCCCCGAGAGGATCGTGGCGGCGGCGAAGGCCACCTATGTGGACCGCTTCGTACGGATGCTGCCGGACGGCT
ACGACACGGTGATCGACGAAGAGGGCTCCAACGTCAGCGCCGGTGAGAAGCAGCTGATCACGATCGCGCGGGCGTTTCTC
TCCGAGCCGTCGATCCTGGTGCTGGACGAGGCCACCAGCTCGGTGGACACCCGTACCGAGGTCCTCATCCAGCGGGCGAT
GGCCTCGCTGCGCAGCGGCCGTACGAGCTTCGTGATCGCCCACCGGCTGTCGACCATCCGGGACGCGGACGTGATCCTGG
TCATGGAGTCGGGGCGGATCGTGGAGCAGGGCTCGCACGACGCGCTGCTCGCGGCCGGGGGCGCGTACGCGCGGCTCTAC
GCGTCCCAGTTCGCCGAGCCGGTGGCGGAAACCGAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(57-362)

ABC transporter (ABC_tran)

(425-573)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.01

93.098

0.391

Multiple sequence alignment