Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACJX2R_RS29170 Genome accession   NZ_CP178360
Coordinates   6947560..6949302 (+) Length   580 a.a.
NCBI ID   WP_413102572.1    Uniprot ID   -
Organism   Streptomyces sp. Inha503     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6942560..6954302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJX2R_RS29135 (ACJX2R_29210) - 6942961..6943218 (-) 258 WP_014053929.1 DUF3099 domain-containing protein -
  ACJX2R_RS29140 (ACJX2R_29215) - 6943379..6943666 (-) 288 WP_020869513.1 DUF1416 domain-containing protein -
  ACJX2R_RS29145 (ACJX2R_29220) - 6943699..6944538 (-) 840 WP_262704465.1 sulfurtransferase -
  ACJX2R_RS29150 (ACJX2R_29225) - 6944696..6944776 (-) 81 WP_351229977.1 Ms5788A family Cys-rich leader peptide -
  ACJX2R_RS29155 (ACJX2R_29230) - 6944988..6945674 (-) 687 WP_413102570.1 DUF2993 domain-containing protein -
  ACJX2R_RS29160 (ACJX2R_29235) - 6945760..6947151 (-) 1392 WP_413102571.1 hypothetical protein -
  ACJX2R_RS29165 (ACJX2R_29240) - 6947163..6947438 (-) 276 WP_262704462.1 MoaD/ThiS family protein -
  ACJX2R_RS29170 (ACJX2R_29245) rcrP 6947560..6949302 (+) 1743 WP_413102572.1 ABC transporter ATP-binding protein Regulator
  ACJX2R_RS29175 (ACJX2R_29250) rcrQ 6949299..6951257 (+) 1959 WP_413102573.1 ABC transporter ATP-binding protein Regulator
  ACJX2R_RS29180 (ACJX2R_29255) - 6951278..6952129 (-) 852 WP_413102574.1 alpha/beta hydrolase -
  ACJX2R_RS29185 (ACJX2R_29260) - 6952385..6953227 (+) 843 WP_413102575.1 winged helix-turn-helix transcriptional regulator -
  ACJX2R_RS29190 (ACJX2R_29265) - 6953251..6954273 (+) 1023 WP_262704458.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 62410.75 Da        Isoelectric Point: 6.6533

>NTDB_id=971432 ACJX2R_RS29170 WP_413102572.1 6947560..6949302(+) (rcrP) [Streptomyces sp. Inha503]
MLVRLIRAYLRPYTRTITLIVLLQLVQTIATLYLPALNADIIDSGVVKGDTGYILRVGGLMIAVTFVQIVCAAGAVYFSA
RTAMALGRDVRAAVFDRVQSFSAREMGHFGAPSLITRTTNDVQQVQMLCLMAFTLMVSAPIMCVGGVVMALNEDVPLSGL
LLLIVPALGLVVTLIARRMRPLFRDVQQRIDTVNRVLREQITGIRVIRAFVRDTHERGRFTDANTGLMDVSLRAGRLMSL
MFPAVMLVVNVSSVAVVWFGGHRIDSGGMQIGALTAFLSYLMQILSSVMMATFMFMMVPRAEVCAERVQEVLDTGTSVVP
PLMPVAPAPADAGRGLLELRGVEFRYPGADAPVLRDISLTARPGRTTAVIGSTGSGKSTLLGLVPRLFDATDGSVHLDGV
DVRDLAPEVMTRAIGLVPQKPYLFAGTVASNLRYGDPDATDEELWRALETAQAREFVAAMEGGLDAPIAQGGTNVSGGQR
QRLAIARALVRKPSVYLFDDSFSALDYATDARLRAALADETDNATVVIVAQRVSTIRGADLIVVLDAGRIVGAGTHGELM
AGNETYREIVLSQLTEEEAA

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=971432 ACJX2R_RS29170 WP_413102572.1 6947560..6949302(+) (rcrP) [Streptomyces sp. Inha503]
GTGCTGGTACGACTGATACGGGCGTATCTGAGGCCCTACACCCGAACGATCACGCTGATCGTCTTATTGCAGCTGGTGCA
GACCATCGCCACCCTCTATCTGCCCGCACTGAACGCGGACATCATCGACAGCGGAGTGGTGAAGGGCGACACCGGCTACA
TCCTCCGTGTCGGCGGGCTGATGATCGCCGTCACCTTCGTCCAGATCGTGTGCGCCGCGGGGGCCGTCTACTTCAGCGCC
CGCACCGCCATGGCGCTCGGCCGCGATGTGCGCGCCGCCGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGGGAGATGGG
CCACTTCGGGGCGCCGTCCCTGATCACCCGCACCACCAACGACGTCCAGCAGGTGCAGATGCTGTGCCTGATGGCCTTCA
CCCTGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGCGTGGTCATGGCGCTCAACGAGGATGTGCCGCTGTCCGGGCTG
CTCCTGCTCATCGTTCCGGCCCTGGGCCTCGTGGTCACCCTCATCGCCCGCCGGATGCGGCCGCTGTTCCGCGACGTCCA
GCAGCGCATCGACACCGTCAACCGGGTGCTGCGCGAGCAGATCACCGGGATCCGGGTCATCCGCGCCTTCGTCCGCGACA
CCCATGAGCGCGGCCGCTTCACCGACGCCAACACCGGGCTGATGGATGTCTCGCTGCGCGCCGGGCGGCTGATGTCGCTG
ATGTTCCCGGCCGTGATGCTGGTGGTGAACGTCTCCAGCGTGGCCGTCGTCTGGTTCGGCGGGCACCGCATCGACAGCGG
CGGGATGCAGATCGGCGCGCTGACCGCGTTCCTCAGCTATCTGATGCAGATCCTGTCGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGAGGGCCGAGGTGTGTGCCGAGCGCGTCCAGGAGGTGCTGGACACCGGGACCAGTGTCGTACCG
CCGCTGATGCCCGTCGCGCCCGCGCCCGCCGACGCCGGACGGGGGCTGCTGGAGCTGCGGGGCGTGGAGTTCCGCTACCC
CGGCGCCGACGCGCCCGTGCTGCGCGACATCTCGCTGACCGCCCGGCCCGGCCGGACCACCGCCGTCATCGGCTCCACCG
GCAGCGGCAAGTCGACCCTGCTCGGGCTGGTGCCGCGGCTGTTCGACGCGACCGACGGCAGCGTCCACCTCGACGGGGTG
GATGTGCGCGACCTCGCCCCCGAGGTGATGACCCGGGCCATAGGGCTGGTCCCGCAGAAGCCGTACCTGTTCGCCGGCAC
CGTCGCCTCAAACCTGCGGTACGGCGACCCCGACGCCACCGACGAGGAGCTGTGGCGGGCCCTGGAGACCGCCCAGGCAC
GGGAGTTCGTGGCGGCCATGGAGGGCGGTCTGGACGCCCCGATCGCCCAGGGCGGAACCAATGTGTCCGGCGGCCAGCGG
CAGCGGCTGGCGATCGCCCGCGCCCTGGTCCGCAAGCCGTCCGTCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTA
CGCCACCGACGCCCGGCTGCGGGCGGCGCTCGCGGACGAGACGGACAACGCGACGGTGGTCATCGTCGCCCAGCGGGTGT
CCACGATCCGGGGCGCCGATCTGATCGTGGTCCTCGACGCGGGGCGGATCGTCGGCGCCGGCACCCACGGCGAGCTGATG
GCCGGCAATGAGACCTATCGCGAGATCGTGCTCTCCCAGCTCACCGAGGAGGAGGCGGCATGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-287)

ABC transporter (ABC_tran)

(354-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.674

95.172

0.378

Multiple sequence alignment