Detailed information NTG0968487

Bioinformatically predicted

Overview

• Name: ssbB
• Type: Machinery gene
• Locus tag: MKX80_RS19825
• Genome accession: NZ_CP150260
• Coordinates: 3886907..3887254 (-)
• Length: 115 a.a.
• NCBI ID: WP_339227460.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-0972
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3881907..3892254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKX80_RS19795 (MKX80_19795)	srlD	3882518..3883303 (-)	786	WP_154994700.1	sorbitol-6-phosphate dehydrogenase	-
MKX80_RS19800 (MKX80_19800)	-	3883318..3883689 (-)	372	WP_268342854.1	PTS glucitol/sorbitol transporter subunit IIA	-
MKX80_RS19805 (MKX80_19805)	-	3883713..3884720 (-)	1008	WP_154994703.1	PTS glucitol/sorbitol transporter subunit IIB	-
MKX80_RS19810 (MKX80_19810)	-	3884738..3885286 (-)	549	WP_043925087.1	PTS glucitol/sorbitol transporter subunit IIC	-
MKX80_RS19815 (MKX80_19815)	-	3885283..3885726 (-)	444	WP_154994705.1	transcriptional regulator GutM	-
MKX80_RS19820 (MKX80_19820)	-	3885723..3886685 (-)	963	WP_268342855.1	sugar-binding transcriptional regulator	-
MKX80_RS19825 (MKX80_19825)	ssbB	3886907..3887254 (-)	348	WP_339227460.1	single-stranded DNA-binding protein	Machinery gene
MKX80_RS19830 (MKX80_19830)	-	3887359..3887730 (-)	372	WP_154994711.1	hypothetical protein	-
MKX80_RS19835 (MKX80_19835)	-	3887912..3888325 (+)	414	WP_154994713.1	YwpF-like family protein	-
MKX80_RS19840 (MKX80_19840)	mscL	3888366..3888746 (-)	381	WP_154994715.1	large conductance mechanosensitive channel protein MscL	-
MKX80_RS19845 (MKX80_19845)	fabZ	3888816..3889250 (-)	435	WP_003185902.1	3-hydroxyacyl-ACP dehydratase FabZ	-
MKX80_RS19850 (MKX80_19850)	-	3889445..3890272 (-)	828	WP_154994717.1	flagellar hook-basal body protein	-
MKX80_RS19855 (MKX80_19855)	-	3890316..3891155 (-)	840	WP_182071106.1	flagellar hook-basal body protein	-

Sequence

Protein

• Length: 115 a.a.
• Molecular weight: 12632.35 Da
• Isoelectric Point: 5.8845

>NTDB_id=968487 MKX80_RS19825 WP_339227460.1 3886907..3887254(-) (ssbB) [Bacillus sp. FSL K6-0972]
MFNEIMLVGRLTKDPELRYTSDGVPVANVTLAVSRPFKNAAGEIEADFVNCTLWRKTAVNTAEYCEKGSIIGLSGRIQTR
QYVNSEGEGVFITEVVARSVRILGESRKAHEPADA

Nucleotide

• Length: 348 bp

>NTDB_id=968487 MKX80_RS19825 WP_339227460.1 3886907..3887254(-) (ssbB) [Bacillus sp. FSL K6-0972]
ATGTTTAATGAGATCATGCTGGTCGGGCGTTTGACAAAAGACCCCGAACTTCGGTATACATCTGACGGTGTCCCTGTTGC
AAATGTGACGCTGGCTGTCAGCAGGCCTTTCAAAAATGCAGCAGGCGAAATTGAAGCGGATTTTGTCAATTGCACGCTGT
GGCGCAAAACTGCCGTGAACACAGCCGAATATTGCGAAAAAGGCTCCATCATCGGGCTGAGCGGAAGAATCCAGACCCGC
CAATACGTCAATTCAGAAGGCGAAGGCGTCTTTATTACAGAAGTTGTCGCCCGGTCAGTCAGAATTTTGGGAGAAAGCCG
AAAAGCGCATGAGCCGGCGGATGCTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB	Bacillus subtilis subsp. subtilis str. 168	71.845	89.565	0.643
ssbA	Bacillus subtilis subsp. subtilis str. 168	58.252	89.565	0.522
ssb	Latilactobacillus sakei subsp. sakei 23K	51.351	96.522	0.496
ssbA	Streptococcus mutans UA159	46.789	94.783	0.443
ssbB	Lactococcus lactis subsp. cremoris KW2	44.34	92.174	0.409
ssbB	Streptococcus sobrinus strain NIDR 6715-7	43.925	93.043	0.409
ssbB/cilA	Streptococcus mitis NCTC 12261	42.991	93.043	0.4
ssbB/cilA	Streptococcus pneumoniae TIGR4	42.991	93.043	0.4
ssbB/cilA	Streptococcus pneumoniae Rx1	42.056	93.043	0.391
ssbB/cilA	Streptococcus pneumoniae D39	42.056	93.043	0.391
ssbB/cilA	Streptococcus pneumoniae R6	42.056	93.043	0.391
ssbB/cilA	Streptococcus mitis SK321	42.056	93.043	0.391