Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | NSU16_RS18035 | Genome accession | NZ_CP150176 |
| Coordinates | 3536777..3537118 (-) | Length | 113 a.a. |
| NCBI ID | WP_010332166.1 | Uniprot ID | A0AAP3CTJ2 |
| Organism | Bacillus sp. FSL K6-1003 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3531777..3542118
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU16_RS18020 (NSU16_18020) | - | 3532014..3534788 (+) | 2775 | WP_268448162.1 | DEAD/DEAH box helicase | - |
| NSU16_RS18025 (NSU16_18025) | - | 3534911..3535768 (-) | 858 | WP_326218506.1 | Cof-type HAD-IIB family hydrolase | - |
| NSU16_RS18030 (NSU16_18030) | - | 3535774..3536550 (-) | 777 | WP_168748938.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NSU16_RS18035 (NSU16_18035) | ssbB | 3536777..3537118 (-) | 342 | WP_010332166.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| NSU16_RS18040 (NSU16_18040) | - | 3537196..3537579 (-) | 384 | WP_010332167.1 | hypothetical protein | - |
| NSU16_RS18045 (NSU16_18045) | - | 3537753..3538163 (+) | 411 | WP_010332168.1 | YwpF-like family protein | - |
| NSU16_RS18050 (NSU16_18050) | blaOXA | 3538217..3539020 (+) | 804 | WP_339191675.1 | class D beta-lactamase | - |
| NSU16_RS18055 (NSU16_18055) | - | 3539102..3539761 (-) | 660 | WP_268504464.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12552.29 Da Isoelectric Point: 8.4667
>NTDB_id=965036 NSU16_RS18035 WP_010332166.1 3536777..3537118(-) (ssbB) [Bacillus sp. FSL K6-1003]
MFNQVMLVGRLTKDPELRYTSAGAAVTHITIAVNRSFKNASGDIEADYVNCTLWRKTAENTALYCQKGSLVGLSGRIQTR
SYENAEGVKVYVTEVMADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPELRYTSAGAAVTHITIAVNRSFKNASGDIEADYVNCTLWRKTAENTALYCQKGSLVGLSGRIQTR
SYENAEGVKVYVTEVMADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=965036 NSU16_RS18035 WP_010332166.1 3536777..3537118(-) (ssbB) [Bacillus sp. FSL K6-1003]
ATGTTCAATCAGGTCATGCTTGTCGGACGGTTAACAAAAGACCCTGAGCTTCGATACACTTCCGCAGGCGCGGCAGTCAC
ACACATTACGATCGCGGTTAACCGCAGCTTCAAAAATGCTTCGGGGGATATTGAAGCGGATTACGTCAATTGCACGCTTT
GGAGAAAAACGGCTGAAAACACGGCGTTATATTGCCAAAAAGGCTCTCTCGTCGGCCTAAGCGGAAGGATTCAGACAAGG
AGCTATGAAAATGCGGAAGGTGTCAAAGTGTATGTAACTGAAGTGATGGCTGACACTGTTCGTTTTATGGATCCTAAACC
TCGGGAAAAAGCTGCCGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGGTTAACAAAAGACCCTGAGCTTCGATACACTTCCGCAGGCGCGGCAGTCAC
ACACATTACGATCGCGGTTAACCGCAGCTTCAAAAATGCTTCGGGGGATATTGAAGCGGATTACGTCAATTGCACGCTTT
GGAGAAAAACGGCTGAAAACACGGCGTTATATTGCCAAAAAGGCTCTCTCGTCGGCCTAAGCGGAAGGATTCAGACAAGG
AGCTATGAAAATGCGGAAGGTGTCAAAGTGTATGTAACTGAAGTGATGGCTGACACTGTTCGTTTTATGGATCCTAAACC
TCGGGAAAAAGCTGCCGATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
92.035 |
100 |
0.92 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
61.321 |
93.805 |
0.575 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.491 |
93.805 |
0.549 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
46.296 |
95.575 |
0.442 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
42.593 |
95.575 |
0.407 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
42.593 |
95.575 |
0.407 |
| ssbA | Streptococcus mutans UA159 |
43.396 |
93.805 |
0.407 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
41.667 |
95.575 |
0.398 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
41.667 |
95.575 |
0.398 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
41.667 |
95.575 |
0.398 |
| ssbB/cilA | Streptococcus mitis SK321 |
41.667 |
95.575 |
0.398 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
39.048 |
92.92 |
0.363 |