Detailed information NTG0960003

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3NH_RS21210
• Genome accession: NZ_CP173509
• Coordinates: 4390914..4391939 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98215
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4385914..4396939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3NH_RS21180 (ACI3NH_21185)	zapB	4385998..4386243 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3NH_RS21185 (ACI3NH_21190)	rraA	4386328..4386813 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3NH_RS21190 (ACI3NH_21195)	menA	4386906..4387832 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3NH_RS21195 (ACI3NH_21200)	hslU	4387899..4389230 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACI3NH_RS21200 (ACI3NH_21205)	hslV	4389240..4389770 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3NH_RS21205 (ACI3NH_21210)	ftsN	4389863..4390822 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACI3NH_RS21210 (ACI3NH_21215)	cytR	4390914..4391939 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3NH_RS21215 (ACI3NH_21220)	priA	4392095..4394293 (-)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
ACI3NH_RS21220 (ACI3NH_21225)	rpmE	4394496..4394708 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3NH_RS21225 (ACI3NH_21230)	yiiX	4394769..4395377 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACI3NH_RS21230 (ACI3NH_21235)	metJ	4395561..4395878 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=960003 ACI3NH_RS21210 WP_000644904.1 4390914..4391939(-) (cytR) [Escherichia coli strain 98215]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=960003 ACI3NH_RS21210 WP_000644904.1 4390914..4391939(-) (cytR) [Escherichia coli strain 98215]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628