Detailed information NTG0095309

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: QML92_RS09310
• Genome accession: NZ_AP025937
• Coordinates: 1824384..1824845 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250539.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700792
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1819384..1829845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QML92_RS09275 (PC0780_18110)	-	1819689..1820513 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
QML92_RS09280 (PC0780_18120)	rnpA	1820488..1820859 (-)	372	WP_000739246.1	ribonuclease P protein component	-
QML92_RS09285	-	1820876..1821007 (-)	132	WP_000768904.1	hypothetical protein	-
QML92_RS09290 (PC0780_18130)	-	1821008..1822198 (-)	1191	WP_000167766.1	acetate kinase	-
QML92_RS09295 (PC0780_18140)	comYH	1822249..1823202 (-)	954	WP_000345100.1	class I SAM-dependent methyltransferase	Machinery gene
QML92_RS09300	-	1823263..1823857 (-)	595	Protein_1815	methyltransferase domain-containing protein	-
QML92_RS09305 (PC0780_18170)	comGG/cglG	1823960..1824406 (-)	447	WP_001842224.1	competence type IV pilus minor pilin ComGG	Machinery gene
QML92_RS09310	comGF/cglF	1824384..1824845 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
QML92_RS09315 (PC0780_18190)	comGE/cglE	1824808..1825110 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
QML92_RS09320 (PC0780_18200)	comGD/cglD	1825073..1825477 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
QML92_RS09325 (PC0780_18210)	comGC/cglC	1825470..1825796 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
QML92_RS09330 (PC0780_18220)	comGB/cglB	1825798..1826814 (-)	1017	WP_078102766.1	competence type IV pilus assembly protein ComGB	Machinery gene
QML92_RS09335 (PC0780_18230)	comGA/cglA/cilD	1826762..1827703 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
QML92_RS09340 (PC0780_18240)	-	1827779..1828144 (-)	366	WP_000286415.1	DUF1033 family protein	-
QML92_RS09345 (PC0780_18250)	-	1828295..1829353 (-)	1059	WP_000649470.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17851.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=95309 QML92_RS09310 WP_000250539.1 1824384..1824845(-) (comGF/cglF) [Streptococcus pneumoniae strain PZ900700792]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=95309 QML92_RS09310 WP_000250539.1 1824384..1824845(-) (comGF/cglF) [Streptococcus pneumoniae strain PZ900700792]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae D39	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae R6	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae TIGR4	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915