Detailed information NTG0095311

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: QML92_RS09320
• Genome accession: NZ_AP025937
• Coordinates: 1825073..1825477 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700792
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1820073..1830477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QML92_RS09280 (PC0780_18120)	rnpA	1820488..1820859 (-)	372	WP_000739246.1	ribonuclease P protein component	-
QML92_RS09285	-	1820876..1821007 (-)	132	WP_000768904.1	hypothetical protein	-
QML92_RS09290 (PC0780_18130)	-	1821008..1822198 (-)	1191	WP_000167766.1	acetate kinase	-
QML92_RS09295 (PC0780_18140)	comYH	1822249..1823202 (-)	954	WP_000345100.1	class I SAM-dependent methyltransferase	Machinery gene
QML92_RS09300	-	1823263..1823857 (-)	595	Protein_1815	methyltransferase domain-containing protein	-
QML92_RS09305 (PC0780_18170)	comGG/cglG	1823960..1824406 (-)	447	WP_001842224.1	competence type IV pilus minor pilin ComGG	Machinery gene
QML92_RS09310	comGF/cglF	1824384..1824845 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
QML92_RS09315 (PC0780_18190)	comGE/cglE	1824808..1825110 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
QML92_RS09320 (PC0780_18200)	comGD/cglD	1825073..1825477 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
QML92_RS09325 (PC0780_18210)	comGC/cglC	1825470..1825796 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
QML92_RS09330 (PC0780_18220)	comGB/cglB	1825798..1826814 (-)	1017	WP_078102766.1	competence type IV pilus assembly protein ComGB	Machinery gene
QML92_RS09335 (PC0780_18230)	comGA/cglA/cilD	1826762..1827703 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
QML92_RS09340 (PC0780_18240)	-	1827779..1828144 (-)	366	WP_000286415.1	DUF1033 family protein	-
QML92_RS09345 (PC0780_18250)	-	1828295..1829353 (-)	1059	WP_000649470.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=95311 QML92_RS09320 WP_000588030.1 1825073..1825477(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700792]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=95311 QML92_RS09320 WP_000588030.1 1825073..1825477(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700792]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463