Detailed information
Bioinformatically predicted
Overview
| Name | pilQ | Type | Machinery gene |
| Locus tag | OCV52_RS14400 | Genome accession | NZ_AP025465 |
| Coordinates | 3108743..3110458 (-) | Length | 571 a.a. |
| NCBI ID | WP_137406900.1 | Uniprot ID | A0A7V7NW66 |
| Organism | Vibrio chagasii strain LMG 21353 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3103743..3115458
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV52_RS14380 | - | 3104431..3105276 (-) | 846 | WP_004737168.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| OCV52_RS14385 | - | 3105346..3106854 (-) | 1509 | WP_137406899.1 | SPOR domain-containing protein | - |
| OCV52_RS14390 | aroB | 3106934..3108022 (-) | 1089 | WP_004737166.1 | 3-dehydroquinate synthase | - |
| OCV52_RS14395 | aroK | 3108048..3108566 (-) | 519 | WP_004737165.1 | shikimate kinase AroK | - |
| OCV52_RS14400 | pilQ | 3108743..3110458 (-) | 1716 | WP_137406900.1 | type IV pilus secretin PilQ | Machinery gene |
| OCV52_RS14405 | pilP | 3110494..3111012 (-) | 519 | WP_137406901.1 | pilus assembly protein PilP | Machinery gene |
| OCV52_RS14410 | pilO | 3110999..3111610 (-) | 612 | WP_137406902.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OCV52_RS14415 | pilN | 3111603..3112202 (-) | 600 | WP_137406903.1 | PilN domain-containing protein | Machinery gene |
| OCV52_RS14420 | pilM | 3112186..3113211 (-) | 1026 | WP_137406904.1 | type IV pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 571 a.a. Molecular weight: 62107.70 Da Isoelectric Point: 4.3506
>NTDB_id=91751 OCV52_RS14400 WP_137406900.1 3108743..3110458(-) (pilQ) [Vibrio chagasii strain LMG 21353]
MNKGISGLVSKALQGFAVSVMLVFSVFGYAESSSNKLENIDFRVNKDKDAVIIIELATSSAVVDVQRAQEGLSIELINTE
VDDDKLYLLDVKDFATLVEGIEVYKETPSTRLLATINSDYQYEYDLKGRFIEVVISKPTIEEVTTEKSVLEKEGKLISIN
FQDIPVRNVLQLIADYNEFNLVVSDSVAGNLTLRLDGVPWQQVLDIILQVKGLDKRVDGNVILVAPKAELDLREQQALEK
SRLEEELGELKSEIIKINFAKATDIADMIGGEGAVSMLSDRGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQ
IEARIVTVTEGNLDELGVRWGVSSTNGSFTVGGSIEGNHPSAITPYDDSSSSVIDDYLNVNLAATSPNASSIAFQVAKLG
SDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPYLESSSSGATSVAFKKAVLSLKVTPQITPDNRLVLDL
SVTQDRPGQVVKTGTGEAVAIDTQRIGTQVLVNNGETVVLGGIFQHSVRSTVDKVPLLGDLPLLGALFRRSYENVGKSEL
LIFVTPKVVIQ
MNKGISGLVSKALQGFAVSVMLVFSVFGYAESSSNKLENIDFRVNKDKDAVIIIELATSSAVVDVQRAQEGLSIELINTE
VDDDKLYLLDVKDFATLVEGIEVYKETPSTRLLATINSDYQYEYDLKGRFIEVVISKPTIEEVTTEKSVLEKEGKLISIN
FQDIPVRNVLQLIADYNEFNLVVSDSVAGNLTLRLDGVPWQQVLDIILQVKGLDKRVDGNVILVAPKAELDLREQQALEK
SRLEEELGELKSEIIKINFAKATDIADMIGGEGAVSMLSDRGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQ
IEARIVTVTEGNLDELGVRWGVSSTNGSFTVGGSIEGNHPSAITPYDDSSSSVIDDYLNVNLAATSPNASSIAFQVAKLG
SDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPYLESSSSGATSVAFKKAVLSLKVTPQITPDNRLVLDL
SVTQDRPGQVVKTGTGEAVAIDTQRIGTQVLVNNGETVVLGGIFQHSVRSTVDKVPLLGDLPLLGALFRRSYENVGKSEL
LIFVTPKVVIQ
Nucleotide
Download Length: 1716 bp
>NTDB_id=91751 OCV52_RS14400 WP_137406900.1 3108743..3110458(-) (pilQ) [Vibrio chagasii strain LMG 21353]
ATGAATAAAGGAATAAGTGGATTAGTGAGCAAAGCTCTACAAGGTTTTGCTGTGTCTGTGATGTTGGTTTTTAGCGTCTT
CGGCTACGCAGAGAGCTCGTCTAATAAATTAGAGAACATTGATTTTAGAGTTAACAAGGATAAAGACGCTGTCATTATCA
TTGAGTTAGCAACCAGTAGCGCGGTGGTTGATGTTCAGCGAGCACAAGAAGGCTTGAGCATCGAACTTATCAATACAGAA
GTGGATGATGACAAGCTCTACCTTTTGGACGTTAAAGATTTCGCGACTCTGGTTGAGGGGATTGAGGTATACAAAGAGAC
GCCAAGCACTCGCTTGCTGGCAACGATTAACAGTGACTACCAATACGAATATGACCTCAAGGGGCGCTTCATCGAGGTGG
TGATCAGCAAGCCCACGATTGAAGAAGTGACGACAGAGAAAAGCGTACTTGAGAAAGAGGGTAAGCTGATATCGATTAAC
TTCCAAGATATCCCAGTTCGAAATGTCCTTCAGTTGATTGCTGACTACAATGAGTTCAACTTGGTGGTATCAGACTCGGT
CGCGGGTAACCTGACGTTACGTTTGGATGGTGTTCCTTGGCAGCAAGTTCTCGACATTATCTTGCAAGTTAAGGGCTTGG
ATAAGCGCGTCGATGGCAACGTTATCTTGGTCGCTCCCAAAGCAGAACTGGATCTGAGAGAACAGCAAGCGCTCGAAAAG
TCCCGTTTAGAAGAAGAGCTTGGGGAACTTAAATCAGAAATCATCAAGATTAACTTTGCTAAAGCCACCGATATAGCTGA
CATGATTGGTGGTGAAGGGGCGGTGAGTATGCTGTCTGATCGCGGTTCAATTACCATAGATGAACGTACGAACTCTCTAC
TGATTCGCGAGCTGGAAGAGAACATTGCGGTGATCCGCGGCATTATTGAGTCGTTAGATATCCCTGTGAAGCAAGTACAG
ATAGAGGCGCGTATTGTTACCGTCACCGAAGGTAACCTTGATGAACTCGGCGTGCGCTGGGGCGTTTCATCGACCAACGG
AAGCTTCACTGTTGGTGGTTCAATTGAAGGCAACCACCCCTCAGCCATTACACCTTATGACGATAGCAGCAGTAGTGTTA
TTGATGACTACCTTAACGTGAATTTGGCGGCAACATCGCCAAATGCATCGAGTATTGCGTTTCAGGTAGCCAAGCTTGGC
TCAGATACGCTGCTCGATCTTGAGTTATCTGCACTGCAACAAGAGTCTAAGGCGGAGATCATCTCTAGCCCACGCTTAAT
CACCACCAATAAAAAGCCGGCTTATATTGAGCAAGGTACTGAAATTCCTTACTTAGAGTCCTCTTCGAGCGGTGCAACGT
CCGTCGCATTTAAGAAAGCTGTGTTGAGTTTGAAAGTTACCCCTCAAATCACACCAGACAATCGCTTGGTTCTGGATTTG
AGTGTGACTCAAGATAGGCCTGGACAAGTGGTGAAAACAGGAACTGGGGAAGCGGTTGCTATAGATACCCAAAGAATAGG
TACGCAAGTGCTTGTTAATAATGGTGAAACTGTTGTTCTTGGTGGAATATTTCAACACAGTGTCAGAAGTACAGTCGATA
AAGTTCCTCTGTTGGGAGACCTTCCTTTATTGGGTGCATTGTTCCGTCGCAGCTACGAAAATGTGGGTAAAAGTGAACTG
CTTATCTTTGTTACACCTAAAGTTGTGATTCAGTAA
ATGAATAAAGGAATAAGTGGATTAGTGAGCAAAGCTCTACAAGGTTTTGCTGTGTCTGTGATGTTGGTTTTTAGCGTCTT
CGGCTACGCAGAGAGCTCGTCTAATAAATTAGAGAACATTGATTTTAGAGTTAACAAGGATAAAGACGCTGTCATTATCA
TTGAGTTAGCAACCAGTAGCGCGGTGGTTGATGTTCAGCGAGCACAAGAAGGCTTGAGCATCGAACTTATCAATACAGAA
GTGGATGATGACAAGCTCTACCTTTTGGACGTTAAAGATTTCGCGACTCTGGTTGAGGGGATTGAGGTATACAAAGAGAC
GCCAAGCACTCGCTTGCTGGCAACGATTAACAGTGACTACCAATACGAATATGACCTCAAGGGGCGCTTCATCGAGGTGG
TGATCAGCAAGCCCACGATTGAAGAAGTGACGACAGAGAAAAGCGTACTTGAGAAAGAGGGTAAGCTGATATCGATTAAC
TTCCAAGATATCCCAGTTCGAAATGTCCTTCAGTTGATTGCTGACTACAATGAGTTCAACTTGGTGGTATCAGACTCGGT
CGCGGGTAACCTGACGTTACGTTTGGATGGTGTTCCTTGGCAGCAAGTTCTCGACATTATCTTGCAAGTTAAGGGCTTGG
ATAAGCGCGTCGATGGCAACGTTATCTTGGTCGCTCCCAAAGCAGAACTGGATCTGAGAGAACAGCAAGCGCTCGAAAAG
TCCCGTTTAGAAGAAGAGCTTGGGGAACTTAAATCAGAAATCATCAAGATTAACTTTGCTAAAGCCACCGATATAGCTGA
CATGATTGGTGGTGAAGGGGCGGTGAGTATGCTGTCTGATCGCGGTTCAATTACCATAGATGAACGTACGAACTCTCTAC
TGATTCGCGAGCTGGAAGAGAACATTGCGGTGATCCGCGGCATTATTGAGTCGTTAGATATCCCTGTGAAGCAAGTACAG
ATAGAGGCGCGTATTGTTACCGTCACCGAAGGTAACCTTGATGAACTCGGCGTGCGCTGGGGCGTTTCATCGACCAACGG
AAGCTTCACTGTTGGTGGTTCAATTGAAGGCAACCACCCCTCAGCCATTACACCTTATGACGATAGCAGCAGTAGTGTTA
TTGATGACTACCTTAACGTGAATTTGGCGGCAACATCGCCAAATGCATCGAGTATTGCGTTTCAGGTAGCCAAGCTTGGC
TCAGATACGCTGCTCGATCTTGAGTTATCTGCACTGCAACAAGAGTCTAAGGCGGAGATCATCTCTAGCCCACGCTTAAT
CACCACCAATAAAAAGCCGGCTTATATTGAGCAAGGTACTGAAATTCCTTACTTAGAGTCCTCTTCGAGCGGTGCAACGT
CCGTCGCATTTAAGAAAGCTGTGTTGAGTTTGAAAGTTACCCCTCAAATCACACCAGACAATCGCTTGGTTCTGGATTTG
AGTGTGACTCAAGATAGGCCTGGACAAGTGGTGAAAACAGGAACTGGGGAAGCGGTTGCTATAGATACCCAAAGAATAGG
TACGCAAGTGCTTGTTAATAATGGTGAAACTGTTGTTCTTGGTGGAATATTTCAACACAGTGTCAGAAGTACAGTCGATA
AAGTTCCTCTGTTGGGAGACCTTCCTTTATTGGGTGCATTGTTCCGTCGCAGCTACGAAAATGTGGGTAAAAGTGAACTG
CTTATCTTTGTTACACCTAAAGTTGTGATTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilQ | Vibrio cholerae O1 biovar El Tor strain E7946 |
77.487 |
100 |
0.778 |
| pilQ | Vibrio cholerae strain A1552 |
77.487 |
100 |
0.778 |
| pilQ | Vibrio campbellii strain DS40M4 |
80.439 |
95.797 |
0.771 |
| pilQ | Legionella pneumophila strain Lp02 |
42.987 |
96.147 |
0.413 |
| pilQ | Legionella pneumophila strain ERS1305867 |
42.987 |
96.147 |
0.413 |
| comQ | Acinetobacter baylyi ADP1 |
39.51 |
100 |
0.396 |
| pilQ | Pseudomonas aeruginosa PAK |
40.179 |
98.074 |
0.394 |
| pilQ | Acinetobacter baumannii strain A118 |
38.235 |
100 |
0.387 |
| pilQ | Acinetobacter baumannii D1279779 |
38.235 |
100 |
0.387 |