Detailed information NTG0911320

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: U0448_RS03625
• Genome accession: NZ_CP139860
• Coordinates: 723959..724354 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 21011
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 718959..729354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0448_RS03600	-	719304..719642 (-)	339	WP_001809290.1	helix-turn-helix transcriptional regulator	-
U0448_RS03605	-	719655..720428 (-)	774	WP_000566048.1	class I SAM-dependent methyltransferase	-
U0448_RS03610	-	720874..721629 (-)	756	Protein_695	epoxyqueuosine reductase QueH	-
U0448_RS03615	groL	721767..723389 (-)	1623	WP_000031573.1	chaperonin GroEL	-
U0448_RS03620	groES	723405..723689 (-)	285	WP_000917330.1	co-chaperone GroES	-
U0448_RS03625	ssbB/cilA	723959..724354 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
U0448_RS03630	-	724432..725193 (-)	762	WP_219600156.1	SDR family oxidoreductase	-
U0448_RS03635	ytpR	725235..725861 (-)	627	WP_000578286.1	YtpR family tRNA-binding protein	-
U0448_RS03640	-	725877..726194 (-)	318	WP_000615776.1	thioredoxin family protein	-
U0448_RS03645	-	726191..726490 (-)	300	WP_001818001.1	DUF4651 domain-containing protein	-
U0448_RS03650	-	726584..726715 (+)	132	WP_001811306.1	hypothetical protein	-
U0448_RS10725	-	726827..726976 (-)	150	Protein_704	cell wall-binding protein	-
U0448_RS03660	-	727182..727856 (-)	675	WP_000725750.1	LiaF transmembrane domain-containing protein	-
U0448_RS03665	-	727862..728308 (-)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
U0448_RS03670	-	728422..728925 (-)	504	WP_000800942.1	phosphatase PAP2 family protein	-
U0448_RS03675	-	728922..729284 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=911320 U0448_RS03625 WP_000282442.1 723959..724354(-) (ssbB/cilA) [Streptococcus pneumoniae strain 21011]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=911320 U0448_RS03625 WP_000282442.1 723959..724354(-) (ssbB/cilA) [Streptococcus pneumoniae strain 21011]
ATGTATAATAAAGTTATCTTGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366