Detailed information NTG0896088

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: R4707_RS03975
• Genome accession: NZ_CP137113
• Coordinates: 747128..747523 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain ZGX
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 742128..752523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4707_RS03950	-	742376..742909 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
R4707_RS03955	-	743243..743449 (-)	207	WP_000775827.1	transcriptional regulator	-
R4707_RS03960	-	743608..744837 (+)	1230	WP_277771348.1	ISL3 family transposase	-
R4707_RS03965	groL	744936..746558 (-)	1623	WP_000031573.1	chaperonin GroEL	-
R4707_RS03970	groES	746574..746858 (-)	285	WP_000917330.1	co-chaperone GroES	-
R4707_RS03975	ssbB/cilA	747128..747523 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
R4707_RS03980	-	747601..748362 (-)	762	WP_001107751.1	SDR family NAD(P)-dependent oxidoreductase	-
R4707_RS03985	ytpR	748404..749030 (-)	627	WP_081543161.1	YtpR family tRNA-binding protein	-
R4707_RS03990	-	749046..749363 (-)	318	WP_000615776.1	thioredoxin family protein	-
R4707_RS03995	-	749360..749659 (-)	300	WP_001818001.1	DUF4651 domain-containing protein	-
R4707_RS04000	-	749753..749884 (+)	132	WP_001811306.1	hypothetical protein	-
R4707_RS11405	-	749996..750191 (-)	196	Protein_771	cell wall-binding protein	-
R4707_RS04010	-	750352..751026 (-)	675	WP_081543159.1	LiaF transmembrane domain-containing protein	-
R4707_RS04015	-	751032..751478 (-)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
R4707_RS04020	-	751592..752095 (-)	504	WP_044789202.1	phosphatase PAP2 family protein	-
R4707_RS04025	-	752092..752454 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=896088 R4707_RS03975 WP_000282442.1 747128..747523(-) (ssbB/cilA) [Streptococcus pneumoniae strain ZGX]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=896088 R4707_RS03975 WP_000282442.1 747128..747523(-) (ssbB/cilA) [Streptococcus pneumoniae strain ZGX]
ATGTATAATAAAGTTATCTTGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACTGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366