Detailed information NTG0895971

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: R4706_RS07085
• Genome accession: NZ_CP137111
• Coordinates: 1391728..1392123 (+)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 17023
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1386728..1397123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4706_RS07030	-	1386807..1387169 (+)	363	WP_000078804.1	DUF2200 domain-containing protein	-
R4706_RS07035	-	1387166..1387669 (+)	504	WP_000800942.1	phosphatase PAP2 family protein	-
R4706_RS07040	-	1387783..1388229 (+)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
R4706_RS07045	-	1388235..1388909 (+)	675	WP_000725750.1	LiaF transmembrane domain-containing protein	-
R4706_RS10820	-	1389154..1389351 (+)	198	Protein_1364	N-acetylmuramoyl-L-alanine amidase family protein	-
R4706_RS07060	-	1389376..1389507 (-)	132	WP_001811306.1	hypothetical protein	-
R4706_RS07065	-	1389601..1389900 (+)	300	WP_001818001.1	DUF4651 domain-containing protein	-
R4706_RS07070	-	1389897..1390214 (+)	318	WP_000615774.1	thioredoxin family protein	-
R4706_RS07075	ytpR	1390230..1390856 (+)	627	WP_044727827.1	YtpR family tRNA-binding protein	-
R4706_RS07080	-	1390889..1391650 (+)	762	WP_001107755.1	SDR family NAD(P)-dependent oxidoreductase	-
R4706_RS07085	ssbB/cilA	1391728..1392123 (+)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
R4706_RS07090	groES	1392393..1392677 (+)	285	WP_000917330.1	co-chaperone GroES	-
R4706_RS07095	groL	1392693..1394315 (+)	1623	WP_000031573.1	chaperonin GroEL	-
R4706_RS07100	-	1394453..1395208 (+)	756	Protein_1373	epoxyqueuosine reductase QueH	-
R4706_RS07105	-	1395654..1396427 (+)	774	WP_000566048.1	class I SAM-dependent methyltransferase	-
R4706_RS07110	-	1396440..1396778 (+)	339	WP_001809290.1	helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=895971 R4706_RS07085 WP_000282442.1 1391728..1392123(+) (ssbB/cilA) [Streptococcus pneumoniae strain 17023]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=895971 R4706_RS07085 WP_000282442.1 1391728..1392123(+) (ssbB/cilA) [Streptococcus pneumoniae strain 17023]
ATGTATAATAAAGTTATCTTGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366