Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   AAHH81_RS05320 Genome accession   NZ_CP152418
Coordinates   1052423..1052887 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae strain 20234287     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1047423..1057887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHH81_RS05300 (AAHH81_05285) - 1048374..1049342 (-) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  AAHH81_RS05305 (AAHH81_05290) pdrM 1049496..1050857 (-) 1362 WP_000278533.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  AAHH81_RS05310 (AAHH81_05295) - 1050868..1051128 (-) 261 WP_001105925.1 hypothetical protein -
  AAHH81_RS05315 (AAHH81_05300) - 1051142..1052410 (-) 1269 WP_369916777.1 dihydroorotase -
  AAHH81_RS05320 (AAHH81_05305) mutX 1052423..1052887 (-) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  AAHH81_RS05325 (AAHH81_05310) - 1052897..1053550 (-) 654 WP_000401326.1 uracil-DNA glycosylase -
  AAHH81_RS05330 (AAHH81_05315) - 1053686..1054288 (-) 603 WP_014931947.1 hypothetical protein -
  AAHH81_RS05335 (AAHH81_05320) - 1054346..1055059 (-) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  AAHH81_RS05340 (AAHH81_05325) dhaM 1055518..1055892 (-) 375 WP_000443793.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  AAHH81_RS05345 (AAHH81_05330) - 1055892..1055966 (-) 75 Protein_1054 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=892490 AAHH81_RS05320 WP_001135768.1 1052423..1052887(-) (mutX) [Streptococcus pneumoniae strain 20234287]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=892490 AAHH81_RS05320 WP_001135768.1 1052423..1052887(-) (mutX) [Streptococcus pneumoniae strain 20234287]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987