Detailed information NTG0087153

Bioinformatically predicted

Overview

• Name: ssbB
• Type: Machinery gene
• Locus tag: BsBEST3145_RS19340
• Genome accession: NZ_AP024625
• Coordinates: 3706267..3706608 (-)
• Length: 113 a.a.
• NCBI ID: WP_014481141.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BEST3109
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3701267..3711608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BsBEST3145_RS19325 (BsBEST3109_37210)	hepAB	3701510..3704278 (+)	2769	WP_014481139.1	DEAD/DEAH box helicase	-
BsBEST3145_RS19330 (BsBEST3109_37220)	ywpJ	3704404..3705261 (-)	858	WP_014481140.1	phosphatase YwpJ	-
BsBEST3145_RS19335 (BsBEST3109_37230)	glcR	3705267..3706043 (-)	777	WP_003244075.1	transcriptional regulator GlcR	-
BsBEST3145_RS19340 (BsBEST3109_37240)	ssbB	3706267..3706608 (-)	342	WP_014481141.1	single-stranded DNA-binding protein SsbB	Machinery gene
BsBEST3145_RS19345	ywpG	3706685..3707067 (-)	383	Protein_3769	DynA interaction protein YwpG	-
BsBEST3145_RS19350 (BsBEST3109_37270)	ywpF	3707242..3707652 (+)	411	WP_014481144.1	YwpF-like family protein	-
BsBEST3145_RS19355 (BsBEST3109_37280)	-	3707792..3708184 (-)	393	Protein_3771	class A sortase	-
BsBEST3145_RS22165	-	3708258..3708410 (-)	153	Protein_3772	prealbumin-like fold domain-containing protein	-
BsBEST3145_RS19365 (BsBEST3109_37300)	ywpD	3708444..3709280 (+)	837	WP_014481147.1	sensor histidine kinase	-
BsBEST3145_RS19370 (BsBEST3109_37310)	mscL	3709328..3709723 (-)	396	WP_072592613.1	large conductance mechanosensitive channel protein MscL	-
BsBEST3145_RS19375 (BsBEST3109_37320)	fabZ	3709796..3710221 (-)	426	WP_003221796.1	3-hydroxyacyl-ACP dehydratase FabZ	-
BsBEST3145_RS19380 (BsBEST3109_37330)	rapD	3710413..3711477 (+)	1065	WP_221252619.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 113 a.a.
• Molecular weight: 12550.17 Da
• Isoelectric Point: 6.9498

>NTDB_id=87153 BsBEST3145_RS19340 WP_014481141.1 3706267..3706608(-) (ssbB) [Bacillus subtilis strain BEST3109]
MFNQVMLVGRLTKDPDLRYTSTGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENEEGVNVYVTEVLADTVRFMDPKPREKAAD

Nucleotide

• Length: 342 bp

>NTDB_id=87153 BsBEST3145_RS19340 WP_014481141.1 3706267..3706608(-) (ssbB) [Bacillus subtilis strain BEST3109]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCACCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGAGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB	Bacillus subtilis subsp. subtilis str. 168	99.115	100	0.991
ssbA	Bacillus subtilis subsp. subtilis str. 168	64.151	93.805	0.602
ssb	Latilactobacillus sakei subsp. sakei 23K	59.434	93.805	0.558
ssbB	Streptococcus sobrinus strain NIDR 6715-7	45.37	95.575	0.434
ssbB/cilA	Streptococcus mitis NCTC 12261	44.444	95.575	0.425
ssbB/cilA	Streptococcus pneumoniae TIGR4	44.444	95.575	0.425
ssbB/cilA	Streptococcus pneumoniae R6	43.519	95.575	0.416
ssbB/cilA	Streptococcus pneumoniae Rx1	43.519	95.575	0.416
ssbB/cilA	Streptococcus pneumoniae D39	43.519	95.575	0.416
ssbB/cilA	Streptococcus mitis SK321	43.519	95.575	0.416
ssbA	Streptococcus mutans UA159	44.34	93.805	0.416
ssbB	Lactococcus lactis subsp. cremoris KW2	41.905	92.92	0.389