Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | LLWG2_RS04450 | Genome accession | NZ_CP129660 |
| Coordinates | 855231..855656 (+) | Length | 141 a.a. |
| NCBI ID | WP_021166254.1 | Uniprot ID | - |
| Organism | Lactococcus cremoris strain Wg2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 850231..860656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLWG2_RS04405 (LLWG2_04425) | - | 850248..850826 (-) | 579 | WP_021166263.1 | SHOCT domain-containing protein | - |
| LLWG2_RS04410 (LLWG2_04430) | - | 850910..851746 (-) | 837 | WP_031286732.1 | S24 family peptidase | - |
| LLWG2_RS04415 (LLWG2_04435) | - | 851963..852142 (+) | 180 | WP_031286731.1 | putative transcriptional regulator | - |
| LLWG2_RS04420 (LLWG2_04440) | - | 852163..852405 (+) | 243 | WP_015966780.1 | helix-turn-helix domain-containing protein | - |
| LLWG2_RS04425 (LLWG2_04445) | - | 852418..853242 (+) | 825 | WP_021166261.1 | phage antirepressor | - |
| LLWG2_RS04430 (LLWG2_04450) | - | 853255..853545 (+) | 291 | WP_021166260.1 | hypothetical protein | - |
| LLWG2_RS04435 (LLWG2_04455) | - | 853612..853848 (+) | 237 | WP_021166259.1 | DUF1408 domain-containing protein | - |
| LLWG2_RS04440 (LLWG2_04460) | - | 853953..854471 (+) | 519 | WP_021166258.1 | host-nuclease inhibitor Gam family protein | - |
| LLWG2_RS04445 (LLWG2_04465) | - | 854480..855238 (+) | 759 | WP_064305187.1 | Rad52/Rad22 family DNA repair protein | - |
| LLWG2_RS04450 (LLWG2_04470) | ssb | 855231..855656 (+) | 426 | WP_021166254.1 | single-stranded DNA-binding protein | Machinery gene |
| LLWG2_RS04455 (LLWG2_04475) | - | 855785..856567 (+) | 783 | WP_015966802.1 | phage replisome organiser protein | - |
| LLWG2_RS04460 (LLWG2_04480) | - | 856567..857292 (+) | 726 | WP_021166253.1 | hypothetical protein | - |
| LLWG2_RS04465 (LLWG2_04485) | - | 857289..858047 (+) | 759 | WP_003132944.1 | site-specific DNA-methyltransferase | - |
| LLWG2_RS04470 (LLWG2_04490) | - | 858037..858426 (+) | 390 | WP_021166252.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LLWG2_RS04475 (LLWG2_04495) | - | 858430..858624 (+) | 195 | WP_021166251.1 | hypothetical protein | - |
| LLWG2_RS04480 (LLWG2_04500) | - | 858617..858856 (+) | 240 | WP_031286728.1 | DUF1031 family protein | - |
| LLWG2_RS04485 (LLWG2_04505) | - | 858968..859147 (+) | 180 | WP_021166249.1 | DUF1497 domain-containing protein | - |
| LLWG2_RS04490 (LLWG2_04510) | - | 859137..859706 (+) | 570 | WP_021166248.1 | DUF658 family protein | - |
| LLWG2_RS04495 (LLWG2_04515) | - | 859717..859977 (+) | 261 | WP_011676533.1 | hypothetical protein | - |
| LLWG2_RS04500 (LLWG2_04520) | - | 859978..860184 (+) | 207 | WP_021166247.1 | DUF1125 domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15758.51 Da Isoelectric Point: 5.1972
>NTDB_id=854806 LLWG2_RS04450 WP_021166254.1 855231..855656(+) (ssb) [Lactococcus cremoris strain Wg2]
MINNVTLVGRITKEPELRYTPQNKAVAAFTLAVNRAFKNANGEREADFINCIIWGKSAENLANWTHKGQLIGVTGSIQTR
NYENQQGQRIYVTEVIANNFQVLEKSNQANNERVGNPASKPQNNDSFGSDLMEISDDDLPF
MINNVTLVGRITKEPELRYTPQNKAVAAFTLAVNRAFKNANGEREADFINCIIWGKSAENLANWTHKGQLIGVTGSIQTR
NYENQQGQRIYVTEVIANNFQVLEKSNQANNERVGNPASKPQNNDSFGSDLMEISDDDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=854806 LLWG2_RS04450 WP_021166254.1 855231..855656(+) (ssb) [Lactococcus cremoris strain Wg2]
ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACCTGAACTTAGATATACACCACAAAATAAAGCAGTTGC
CGCTTTTACTCTTGCAGTTAATCGAGCATTTAAAAATGCTAATGGAGAAAGAGAAGCTGACTTTATCAATTGTATTATTT
GGGGTAAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTACTGGTAGTATTCAAACTCGA
AACTATGAGAACCAACAAGGGCAACGAATTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTTGAAAAAAGTAA
CCAAGCAAATAATGAACGAGTTGGTAATCCAGCTTCAAAACCACAAAATAATGATTCTTTTGGAAGTGATCTAATGGAAA
TTTCAGATGATGACCTACCATTCTAA
ATGATTAACAATGTCACTCTAGTAGGGCGAATCACTAAAGAACCTGAACTTAGATATACACCACAAAATAAAGCAGTTGC
CGCTTTTACTCTTGCAGTTAATCGAGCATTTAAAAATGCTAATGGAGAAAGAGAAGCTGACTTTATCAATTGTATTATTT
GGGGTAAATCAGCCGAAAACTTGGCCAATTGGACTCATAAAGGTCAATTAATTGGAGTTACTGGTAGTATTCAAACTCGA
AACTATGAGAACCAACAAGGGCAACGAATTTATGTAACAGAAGTCATTGCAAACAATTTCCAAGTACTTGAAAAAAGTAA
CCAAGCAAATAATGAACGAGTTGGTAATCCAGCTTCAAAACCACAAAATAATGATTCTTTTGGAAGTGATCTAATGGAAA
TTTCAGATGATGACCTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.765 |
100 |
0.624 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.581 |
100 |
0.617 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.39 |
100 |
0.454 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
43.357 |
100 |
0.44 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
43.357 |
100 |
0.44 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
42.657 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
42.657 |
100 |
0.433 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
42.657 |
100 |
0.433 |
| ssbB/cilA | Streptococcus mitis SK321 |
42.657 |
100 |
0.433 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.692 |
73.759 |
0.426 |
| ssbA | Streptococcus mutans UA159 |
40.426 |
100 |
0.404 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
50.485 |
73.05 |
0.369 |