Detailed information NTG0830838

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: QL280_RS08695
• Genome accession: NZ_CP125291
• Coordinates: 1709913..1710308 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 105_Kz
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1704913..1715308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QL280_RS08670 (QL280_08670)	recX	1704989..1705765 (+)	777	WP_000705100.1	recombination regulator RecX	-
QL280_RS08675 (QL280_08675)	-	1705854..1706387 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
QL280_RS08680 (QL280_08680)	-	1706828..1707583 (-)	756	Protein_1701	epoxyqueuosine reductase QueH	-
QL280_RS08685 (QL280_08685)	groL	1707721..1709343 (-)	1623	WP_000031573.1	chaperonin GroEL	-
QL280_RS08690 (QL280_08690)	groES	1709359..1709643 (-)	285	WP_000917313.1	co-chaperone GroES	-
QL280_RS08695 (QL280_08695)	ssbB/cilA	1709913..1710308 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
QL280_RS08700 (QL280_08700)	-	1710386..1711147 (-)	762	WP_001107767.1	SDR family NAD(P)-dependent oxidoreductase	-
QL280_RS08705 (QL280_08705)	ytpR	1711180..1711806 (-)	627	WP_000578318.1	YtpR family tRNA-binding protein	-
QL280_RS08710 (QL280_08710)	-	1711822..1712139 (-)	318	WP_000615769.1	thioredoxin family protein	-
QL280_RS08715 (QL280_08715)	-	1712136..1712435 (-)	300	WP_001013976.1	DUF4651 domain-containing protein	-
QL280_RS08720 (QL280_08720)	-	1712633..1712713 (-)	81	WP_223200463.1	hypothetical protein	-
QL280_RS08725 (QL280_08725)	-	1712720..1712911 (-)	192	WP_000291826.1	cell wall-binding protein	-
QL280_RS08730 (QL280_08730)	-	1713072..1713746 (-)	675	WP_000725745.1	hypothetical protein	-
QL280_RS08735 (QL280_08735)	-	1713752..1714198 (-)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
QL280_RS08740 (QL280_08740)	-	1714300..1714815 (-)	516	WP_000800937.1	phosphatase PAP2 family protein	-
QL280_RS08745 (QL280_08745)	-	1714812..1715174 (-)	363	WP_000078808.1	DUF2200 family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=830838 QL280_RS08695 WP_000282442.1 1709913..1710308(-) (ssbB/cilA) [Streptococcus pneumoniae strain 105_Kz]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=830838 QL280_RS08695 WP_000282442.1 1709913..1710308(-) (ssbB/cilA) [Streptococcus pneumoniae strain 105_Kz]
ATGTATAATAAAGTTATCTTGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366