Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R8522_RS02785 Genome accession   NZ_AP026916
Coordinates   541025..541291 (+) Length   88 a.a.
NCBI ID   WP_001852152.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700006     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 536025..546291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8522_RS02765 (PC0006_05650) - 536236..536745 (+) 510 WP_000619941.1 N-acetyltransferase -
  R8522_RS02770 (PC0006_05660) pheT 536822..539227 (+) 2406 WP_000961506.1 phenylalanine--tRNA ligase subunit beta -
  R8522_RS02775 (PC0006_05670) - 539295..540296 (-) 1002 WP_000597972.1 endonuclease/exonuclease/phosphatase family protein -
  R8522_RS02780 (PC0006_05680) - 540452..540940 (+) 489 Protein_551 transposase -
  R8522_RS02785 (PC0006_05690) HI0659 541025..541291 (+) 267 WP_001852152.1 helix-turn-helix domain-containing protein Machinery gene
  R8522_RS02790 (PC0006_05700) metE 541551..543800 (+) 2250 WP_000108189.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R8522_RS02795 (PC0006_05710) metF 543864..544730 (+) 867 WP_000089981.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9558.11 Da        Isoelectric Point: 4.8274

>NTDB_id=81577 R8522_RS02785 WP_001852152.1 541025..541291(+) (HI0659) [Streptococcus pneumoniae strain PZ900700006]
MEGCPSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=81577 R8522_RS02785 WP_001852152.1 541025..541291(+) (HI0659) [Streptococcus pneumoniae strain PZ900700006]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

62.338

87.5

0.545

Multiple sequence alignment