Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | H7X90_RS17235 | Genome accession | NZ_AP021908 |
| Coordinates | 3725966..3726373 (-) | Length | 135 a.a. |
| NCBI ID | WP_099474769.1 | Uniprot ID | - |
| Organism | Stenotrophomonas maltophilia strain WP1-W18-CRE-01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3720966..3731373
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7X90_RS17225 (WP1W18C01_33670) | pilR | 3722511..3723884 (+) | 1374 | WP_005410795.1 | sigma-54 dependent transcriptional regulator | Regulator |
| H7X90_RS17230 (WP1W18C01_33680) | pilB | 3724010..3725743 (-) | 1734 | WP_005414305.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| H7X90_RS17235 (WP1W18C01_33690) | pilA/pilAI | 3725966..3726373 (-) | 408 | WP_099474769.1 | pilin | Machinery gene |
| H7X90_RS17240 (WP1W18C01_33700) | - | 3726526..3726963 (-) | 438 | WP_183153553.1 | pilin | - |
| H7X90_RS17245 (WP1W18C01_33710) | pilC | 3727316..3728575 (+) | 1260 | WP_099474767.1 | type II secretion system F family protein | Machinery gene |
| H7X90_RS17250 (WP1W18C01_33720) | - | 3728583..3729446 (+) | 864 | WP_065183902.1 | A24 family peptidase | - |
| H7X90_RS17255 (WP1W18C01_33730) | coaE | 3729458..3730069 (+) | 612 | WP_183153554.1 | dephospho-CoA kinase | - |
| H7X90_RS17260 (WP1W18C01_33740) | - | 3730404..3731318 (+) | 915 | WP_005407612.1 | IS110-like element ISStma6 family transposase | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14356.51 Da Isoelectric Point: 5.5999
>NTDB_id=75779 H7X90_RS17235 WP_099474769.1 3725966..3726373(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain WP1-W18-CRE-01]
MNTQKGFTLIELMIVVAIIGILAAIATVAFQPYIIRTQLTAALADISPGKMLVETVVYENRSASLVTPEFIGGAQNAHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFETRYRPTGC
MNTQKGFTLIELMIVVAIIGILAAIATVAFQPYIIRTQLTAALADISPGKMLVETVVYENRSASLVTPEFIGGAQNAHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFETRYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=75779 H7X90_RS17235 WP_099474769.1 3725966..3726373(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain WP1-W18-CRE-01]
ATGAACACGCAGAAGGGCTTTACGCTCATCGAGCTGATGATCGTGGTGGCCATCATCGGCATTCTGGCGGCCATCGCGAC
GGTGGCGTTCCAGCCATACATCATCCGTACCCAGCTGACGGCCGCGCTGGCCGACATCAGCCCGGGCAAGATGCTGGTTG
AAACGGTCGTCTATGAAAACCGCTCGGCCAGCCTGGTCACCCCCGAGTTCATCGGCGGTGCCCAGAACGCCCACTGCTCG
AACGTTGAAGCCGAACTCAGCGATTCCGGTGTCGGCCACATCAGCTGCACCCTCAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAACGCGCTATCGCCCGACCG
GCTGCTGA
ATGAACACGCAGAAGGGCTTTACGCTCATCGAGCTGATGATCGTGGTGGCCATCATCGGCATTCTGGCGGCCATCGCGAC
GGTGGCGTTCCAGCCATACATCATCCGTACCCAGCTGACGGCCGCGCTGGCCGACATCAGCCCGGGCAAGATGCTGGTTG
AAACGGTCGTCTATGAAAACCGCTCGGCCAGCCTGGTCACCCCCGAGTTCATCGGCGGTGCCCAGAACGCCCACTGCTCG
AACGTTGAAGCCGAACTCAGCGATTCCGGTGTCGGCCACATCAGCTGCACCCTCAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAACGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
47.794 |
100 |
0.481 |
| pilA | Acinetobacter baumannii strain A118 |
42.336 |
100 |
0.43 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.647 |
100 |
0.43 |
| pilA | Pseudomonas aeruginosa PAK |
37.748 |
100 |
0.422 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.58 |
100 |
0.415 |
| pilE | Neisseria gonorrhoeae MS11 |
33.333 |
100 |
0.415 |
| comP | Acinetobacter baylyi ADP1 |
36 |
100 |
0.4 |
| pilA2 | Legionella pneumophila str. Paris |
39.552 |
99.259 |
0.393 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.594 |
98.519 |
0.37 |