Detailed information NTG0736767

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: P8R49_RS14140
• Genome accession: NZ_CP121266
• Coordinates: 2608301..2608906 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain 107105
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2603301..2613906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P8R49_RS14110 (P8R49_14110)	-	2604114..2604503 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
P8R49_RS14115 (P8R49_14115)	yajC	2604560..2604826 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
P8R49_RS14120 (P8R49_14120)	tgt	2604863..2606008 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
P8R49_RS14125 (P8R49_14125)	queA	2606035..2607063 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
P8R49_RS14130 (P8R49_14130)	yrzS	2607093..2607293 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
P8R49_RS14135 (P8R49_14135)	ruvB	2607286..2608290 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
P8R49_RS14140 (P8R49_14140)	ruvA	2608301..2608906 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
P8R49_RS14145 (P8R49_14145)	bofC	2609045..2609557 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
P8R49_RS14150 (P8R49_14150)	csbX	2609605..2610912 (-)	1308	WP_014480439.1	MFS transporter	-
P8R49_RS14155 (P8R49_14155)	iolG	2610983..2612008 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
P8R49_RS14160 (P8R49_14160)	yrzF	2612246..2612893 (+)	648	WP_014480441.1	phosphotransferase	-
P8R49_RS14165 (P8R49_14165)	-	2612939..2613061 (-)	123	WP_003229707.1	hypothetical protein	-
P8R49_RS14170 (P8R49_14170)	-	2613146..2613220 (+)	75	Protein_2740	hypothetical protein	-
P8R49_RS14175 (P8R49_14175)	-	2613224..2613592 (+)	369	WP_186437837.1	DUF5412 family protein	-
P8R49_RS14180 (P8R49_14180)	-	2613599..2613739 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=736767 P8R49_RS14140 WP_003229717.1 2608301..2608906(-) (ruvA) [Bacillus subtilis strain 107105]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=736767 P8R49_RS14140 WP_003229717.1 2608301..2608906(-) (ruvA) [Bacillus subtilis strain 107105]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408