Detailed information NTG0072088

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: SHINM1_RS11645
• Genome accession: NZ_AP019011
• Coordinates: 1319012..1319434 (-)
• Length: 140 a.a.
• NCBI ID: WP_162049463.1
• Uniprot ID: -
• Organism: Fluviibacter phosphoraccumulans strain SHINM1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1314012..1324434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SHINM1_RS06560 (SHINM1_012930)	-	1314238..1315263 (+)	1026	WP_202930704.1	CorA family divalent cation transporter	-
SHINM1_RS06565 (SHINM1_012940)	-	1315336..1316175 (+)	840	WP_202930705.1	UDP-2,3-diacylglucosamine diphosphatase	-
SHINM1_RS06570 (SHINM1_012950)	-	1316157..1317182 (+)	1026	WP_162049467.1	glycosyltransferase family 4 protein	-
SHINM1_RS06575 (SHINM1_012960)	-	1317160..1317597 (+)	438	WP_162049466.1	diacylglycerol kinase	-
SHINM1_RS06580 (SHINM1_012970)	-	1317612..1318100 (+)	489	WP_162049465.1	SixA phosphatase family protein	-
SHINM1_RS06585 (SHINM1_012980)	-	1318195..1319004 (+)	810	WP_162049464.1	GNAT family N-acetyltransferase	-
SHINM1_RS11645 (SHINM1_012990)	pilE	1319012..1319434 (-)	423	WP_162049463.1	pilin	Machinery gene
SHINM1_RS06595 (SHINM1_013000)	-	1319476..1320474 (-)	999	WP_211148803.1	ornithine cyclodeaminase family protein	-
SHINM1_RS06600 (SHINM1_013010)	-	1320499..1321137 (-)	639	WP_162049461.1	hypothetical protein	-
SHINM1_RS06605 (SHINM1_013020)	-	1321134..1321763 (-)	630	WP_162049460.1	phosphoribosyltransferase	-
SHINM1_RS06610 (SHINM1_013030)	-	1321750..1322340 (-)	591	WP_162049459.1	phosphoribosyltransferase family protein	-
SHINM1_RS06615 (SHINM1_013040)	-	1322391..1322780 (-)	390	WP_162049458.1	DUF779 domain-containing protein	-
SHINM1_RS06620 (SHINM1_013050)	adh	1322780..1324297 (-)	1518	WP_162049457.1	aldehyde dehydrogenase	-

Sequence

Protein

• Length: 140 a.a.
• Molecular weight: 14266.41 Da
• Isoelectric Point: 8.0987

>NTDB_id=72088 SHINM1_RS11645 WP_162049463.1 1319012..1319434(-) (pilE) [Fluviibacter phosphoraccumulans strain SHINM1]
MRKSMQAGFTLIELMVVIAIVGILAAVALPAYQNYTVRAKVSEGLLAASACKISVTEAVQSGATAIPNNLCSGSTQYVES
VTSGGDASNATVTVALKGIDKNVDGKSIVYTGAIANATITGWTCTTALDQKYVPSGCTGK

Nucleotide

• Length: 423 bp

>NTDB_id=72088 SHINM1_RS11645 WP_162049463.1 1319012..1319434(-) (pilE) [Fluviibacter phosphoraccumulans strain SHINM1]
ATGCGTAAGTCGATGCAAGCAGGCTTTACCCTGATCGAACTGATGGTGGTGATTGCCATCGTGGGCATTCTGGCAGCGGT
TGCGTTGCCGGCTTATCAGAACTACACCGTCCGCGCTAAGGTGTCGGAAGGTCTGCTTGCAGCATCTGCCTGTAAGATTT
CAGTGACTGAAGCCGTGCAGAGCGGTGCTACGGCCATCCCCAACAATCTGTGTTCGGGTAGCACTCAGTACGTCGAAAGC
GTTACCTCAGGGGGCGATGCCAGCAACGCTACGGTAACCGTTGCCTTGAAGGGTATTGATAAGAATGTCGATGGTAAATC
GATCGTTTATACCGGTGCCATCGCCAACGCCACTATTACTGGCTGGACTTGTACCACCGCACTGGACCAGAAGTACGTCC
CCTCCGGTTGTACGGGTAAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (4-29)

• Pilin (bacterial filament) (Pilin) (37-138)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	39.037	100	0.521
comP	Acinetobacter baylyi ADP1	45.395	100	0.493
pilE	Neisseria gonorrhoeae MS11	37.195	100	0.436
pilA2	Legionella pneumophila strain ERS1305867	41.379	100	0.429
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.136	100	0.421
pilA2	Legionella pneumophila str. Paris	41.727	99.286	0.414
pilE	Neisseria gonorrhoeae strain FA1090	36.076	100	0.407
pilA	Acinetobacter baumannii strain A118	39.007	100	0.393
pilA/pilA1	Eikenella corrodens VA1	34.641	100	0.379
pilA/pilAII	Pseudomonas stutzeri DSM 10701	37.857	100	0.379
pilA	Glaesserella parasuis strain SC1401	33.333	100	0.364