Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | NQD70_RS01160 | Genome accession | NZ_CP101991 |
| Coordinates | 197325..197798 (+) | Length | 157 a.a. |
| NCBI ID | WP_000609569.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain BCJB4361 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 192325..202798
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQD70_RS01120 (NQD70_01125) | - | 192683..192880 (-) | 198 | WP_000880826.1 | hypothetical protein | - |
| NQD70_RS01125 (NQD70_01130) | - | 192899..193639 (-) | 741 | WP_000580170.1 | helix-turn-helix transcriptional regulator | - |
| NQD70_RS01130 (NQD70_01135) | - | 193793..194014 (+) | 222 | WP_000215930.1 | helix-turn-helix transcriptional regulator | - |
| NQD70_RS01135 (NQD70_01140) | - | 194269..194418 (+) | 150 | WP_001074679.1 | BOW99_gp33 family protein | - |
| NQD70_RS01140 (NQD70_01145) | - | 194458..194790 (+) | 333 | WP_000072970.1 | hypothetical protein | - |
| NQD70_RS01145 (NQD70_01150) | - | 195011..195682 (+) | 672 | WP_000131170.1 | ERF family protein | - |
| NQD70_RS01150 (NQD70_01155) | - | 195686..196681 (+) | 996 | WP_000159058.1 | DUF1351 domain-containing protein | - |
| NQD70_RS01155 (NQD70_01160) | - | 196683..197234 (+) | 552 | WP_001010334.1 | MazG-like family protein | - |
| NQD70_RS01160 (NQD70_01165) | ssbA | 197325..197798 (+) | 474 | WP_000609569.1 | single-stranded DNA-binding protein | Machinery gene |
| NQD70_RS01165 (NQD70_01170) | - | 197795..198073 (+) | 279 | WP_001082484.1 | hypothetical protein | - |
| NQD70_RS01170 (NQD70_01175) | - | 198087..198878 (+) | 792 | WP_029667750.1 | DNA methyltransferase | - |
| NQD70_RS01175 (NQD70_01180) | - | 198865..199068 (+) | 204 | WP_000163592.1 | hypothetical protein | - |
| NQD70_RS01180 (NQD70_01185) | - | 199065..199478 (+) | 414 | WP_000862186.1 | helix-turn-helix domain-containing protein | - |
| NQD70_RS01185 (NQD70_01190) | - | 199491..199922 (+) | 432 | WP_000412398.1 | hypothetical protein | - |
| NQD70_RS01190 (NQD70_01195) | - | 199924..200658 (+) | 735 | WP_309164560.1 | hypothetical protein | - |
| NQD70_RS01195 (NQD70_01200) | - | 200710..200958 (+) | 249 | WP_001065277.1 | hypothetical protein | - |
| NQD70_RS01200 (NQD70_01205) | - | 200958..201131 (+) | 174 | WP_017646541.1 | hypothetical protein | - |
| NQD70_RS01205 (NQD70_01210) | - | 201301..201627 (+) | 327 | WP_000836878.1 | DUF1372 family protein | - |
| NQD70_RS01210 (NQD70_01215) | - | 201760..202368 (+) | 609 | WP_001019158.1 | DUF1642 domain-containing protein | - |
| NQD70_RS01215 (NQD70_01220) | - | 202355..202603 (+) | 249 | WP_000958011.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17413.09 Da Isoelectric Point: 4.6460
>NTDB_id=713733 NQD70_RS01160 WP_000609569.1 197325..197798(+) (ssbA) [Streptococcus agalactiae strain BCJB4361]
MINNVVLVGRLTKDAELRYTPSNVAVATFTLAVNRPYKNDAGEREADFINCVIWRQSAENLANWAKKGSLIGITGTIQTR
NYENQQGQRVYVTEVIASNFQLLESRSSQQDNQGGNFQNGNNQGNFGNPGGYQSPFSNSTPMDISDDDLPFQDRSTI
MINNVVLVGRLTKDAELRYTPSNVAVATFTLAVNRPYKNDAGEREADFINCVIWRQSAENLANWAKKGSLIGITGTIQTR
NYENQQGQRVYVTEVIASNFQLLESRSSQQDNQGGNFQNGNNQGNFGNPGGYQSPFSNSTPMDISDDDLPFQDRSTI
Nucleotide
Download Length: 474 bp
>NTDB_id=713733 NQD70_RS01160 WP_000609569.1 197325..197798(+) (ssbA) [Streptococcus agalactiae strain BCJB4361]
ATGATTAACAATGTTGTACTGGTTGGAAGATTGACAAAGGATGCTGAACTAAGATACACGCCATCAAATGTGGCTGTTGC
TACCTTTACTCTCGCAGTTAATCGCCCATACAAAAACGATGCGGGAGAACGAGAGGCTGATTTTATCAATTGTGTTATCT
GGAGACAATCCGCAGAAAACCTTGCTAATTGGGCTAAAAAAGGCTCGTTGATCGGCATTACAGGTACAATTCAAACACGC
AACTACGAAAATCAACAAGGGCAGCGCGTGTATGTGACAGAGGTTATTGCTAGTAATTTCCAACTGCTAGAAAGTCGCAG
TAGTCAGCAAGATAATCAAGGTGGCAATTTCCAAAATGGAAATAACCAAGGTAATTTTGGAAATCCGGGAGGTTATCAAT
CACCATTTAGCAACTCAACTCCTATGGACATCAGCGATGATGATTTGCCTTTCCAAGATAGGAGTACTATATGA
ATGATTAACAATGTTGTACTGGTTGGAAGATTGACAAAGGATGCTGAACTAAGATACACGCCATCAAATGTGGCTGTTGC
TACCTTTACTCTCGCAGTTAATCGCCCATACAAAAACGATGCGGGAGAACGAGAGGCTGATTTTATCAATTGTGTTATCT
GGAGACAATCCGCAGAAAACCTTGCTAATTGGGCTAAAAAAGGCTCGTTGATCGGCATTACAGGTACAATTCAAACACGC
AACTACGAAAATCAACAAGGGCAGCGCGTGTATGTGACAGAGGTTATTGCTAGTAATTTCCAACTGCTAGAAAGTCGCAG
TAGTCAGCAAGATAATCAAGGTGGCAATTTCCAAAATGGAAATAACCAAGGTAATTTTGGAAATCCGGGAGGTTATCAAT
CACCATTTAGCAACTCAACTCCTATGGACATCAGCGATGATGATTTGCCTTTCCAAGATAGGAGTACTATATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.25 |
100 |
0.631 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.235 |
100 |
0.631 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.484 |
97.452 |
0.414 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.389 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
51.282 |
74.522 |
0.382 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.545 |
70.064 |
0.382 |
| ssb | Vibrio cholerae strain A1552 |
33.523 |
100 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
50.427 |
74.522 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
50.427 |
74.522 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
50.427 |
74.522 |
0.376 |
| ssbB/cilA | Streptococcus mitis SK321 |
50.427 |
74.522 |
0.376 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
50.427 |
74.522 |
0.376 |