Detailed information NTG0069069

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: STO1_RS06735
• Genome accession: NZ_AP018338
• Coordinates: 1332513..1332983 (-)
• Length: 156 a.a.
• NCBI ID: WP_000609596.1
• Uniprot ID: A0A139PWT6
• Organism: Streptococcus oralis subsp. tigurinus strain osk_001
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1327513..1337983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STO1_RS06705 (STO1_013050)	-	1327584..1328894 (-)	1311	WP_096422535.1	glycosyltransferase family 2 protein	-
STO1_RS06715 (STO1_013060)	-	1329037..1329816 (-)	780	WP_084911357.1	hypothetical protein	-
STO1_RS06720 (STO1_013070)	wecB	1329823..1330971 (-)	1149	WP_096422539.1	non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase	-
STO1_RS06725 (STO1_013080)	-	1331403..1331912 (-)	510	WP_096422541.1	GNAT family N-acetyltransferase	-
STO1_RS06730 (STO1_013090)	rpsR	1332242..1332481 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
STO1_RS06735 (STO1_013100)	ssbA	1332513..1332983 (-)	471	WP_000609596.1	single-stranded DNA-binding protein SsbA	Machinery gene
STO1_RS06740 (STO1_013110)	rpsF	1332995..1333285 (-)	291	WP_049505311.1	30S ribosomal protein S6	-
STO1_RS06745 (STO1_013120)	asnS	1333434..1334777 (-)	1344	WP_096422543.1	asparagine--tRNA ligase	-
STO1_RS06750 (STO1_013130)	-	1334926..1336104 (-)	1179	WP_096422545.1	pyridoxal phosphate-dependent aminotransferase	-
STO1_RS06755 (STO1_013140)	-	1336114..1336590 (-)	477	WP_096422547.1	DUF5590 domain-containing protein	-
STO1_RS06760 (STO1_013150)	-	1336710..1337156 (+)	447	WP_083321209.1	MarR family winged helix-turn-helix transcriptional regulator	-
STO1_RS06765 (STO1_013160)	-	1337247..1337795 (+)	549	WP_096422549.1	NADPH-dependent FMN reductase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17196.10 Da
• Isoelectric Point: 5.2065

>NTDB_id=69069 STO1_RS06735 WP_000609596.1 1332513..1332983(-) (ssbA) [Streptococcus oralis subsp. tigurinus strain osk_001]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGITGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRGVREGHTGGAYSAPTAGQSAPANPVPDFSRSENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=69069 STO1_RS06735 WP_000609596.1 1332513..1332983(-) (ssbA) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGCGAACGTGAGGCTGATTTCATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCCAACTGGGCTAAAAAAGGCTCTCTTATCGGGATCACAGGCCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTAACAGAAGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGCGG
AGTGCGCGAAGGACATACAGGTGGGGCTTATTCTGCACCAACTGCTGGTCAATCAGCACCTGCAAACCCAGTACCAGACT
TTTCACGTTCTGAAAATCCATTCGGAGCAACCAATCCATTGGACATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A139PWT6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	54.651	100	0.603
ssb	Latilactobacillus sakei subsp. sakei 23K	52.841	100	0.596
ssbB/cilA	Streptococcus pneumoniae TIGR4	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssb	Neisseria gonorrhoeae MS11	33.714	100	0.378
ssbB/cilA	Streptococcus pneumoniae R6	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae Rx1	49.573	75	0.372
ssbB/cilA	Streptococcus pneumoniae D39	49.573	75	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	49.573	75	0.372
ssbB/cilA	Streptococcus mitis SK321	49.573	75	0.372
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.717	67.949	0.372
ssb	Neisseria meningitidis MC58	32.571	100	0.365