Detailed information NTG0068415

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: CTB89_RS08410
• Genome accession: NZ_AP017891
• Coordinates: 1693402..1693713 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain GN3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1688402..1698713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTB89_RS08375	gcvPA	1688904..1690250 (-)	1347	WP_020977293.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
CTB89_RS08380	gcvT	1690270..1691361 (-)	1092	WP_020977294.1	glycine cleavage system aminomethyltransferase GcvT	-
CTB89_RS08385	-	1691520..1692044 (-)	525	WP_020977295.1	shikimate kinase	-
CTB89_RS08390	-	1692034..1692180 (-)	147	WP_001789879.1	hypothetical protein	-
CTB89_RS08395	comGF	1692277..1692774 (-)	498	WP_020977296.1	competence type IV pilus minor pilin ComGF	Machinery gene
CTB89_RS08400	comGE	1692692..1692991 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
CTB89_RS08405	comGD	1692978..1693424 (-)	447	WP_001796473.1	competence type IV pilus minor pilin ComGD	Machinery gene
CTB89_RS08410	comGC	1693402..1693713 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
CTB89_RS08415	comGB	1693727..1694797 (-)	1071	WP_000776407.1	competence type IV pilus assembly protein ComGB	Machinery gene
CTB89_RS08420	comGA	1694769..1695743 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
CTB89_RS08425	-	1695795..1696418 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
CTB89_RS08430	-	1696415..1696744 (-)	330	WP_020977297.1	MTH1187 family thiamine-binding protein	-
CTB89_RS08435	-	1696744..1697730 (-)	987	WP_000161315.1	ROK family glucokinase	-
CTB89_RS08440	-	1697727..1697930 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=68415 CTB89_RS08410 WP_000472256.1 1693402..1693713(-) (comGC) [Staphylococcus aureus strain GN3]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=68415 CTB89_RS08410 WP_000472256.1 1693402..1693713(-) (comGC) [Staphylococcus aureus strain GN3]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369