Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CTB89_RS08400 | Genome accession | NZ_AP017891 |
| Coordinates | 1692692..1692991 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain GN3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1687692..1697991
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTB89_RS08375 | gcvPA | 1688904..1690250 (-) | 1347 | WP_020977293.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CTB89_RS08380 | gcvT | 1690270..1691361 (-) | 1092 | WP_020977294.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CTB89_RS08385 | - | 1691520..1692044 (-) | 525 | WP_020977295.1 | shikimate kinase | - |
| CTB89_RS08390 | - | 1692034..1692180 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CTB89_RS08395 | comGF | 1692277..1692774 (-) | 498 | WP_020977296.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CTB89_RS08400 | comGE | 1692692..1692991 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CTB89_RS08405 | comGD | 1692978..1693424 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CTB89_RS08410 | comGC | 1693402..1693713 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CTB89_RS08415 | comGB | 1693727..1694797 (-) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CTB89_RS08420 | comGA | 1694769..1695743 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CTB89_RS08425 | - | 1695795..1696418 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CTB89_RS08430 | - | 1696415..1696744 (-) | 330 | WP_020977297.1 | MTH1187 family thiamine-binding protein | - |
| CTB89_RS08435 | - | 1696744..1697730 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| CTB89_RS08440 | - | 1697727..1697930 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=68413 CTB89_RS08400 WP_000844413.1 1692692..1692991(-) (comGE) [Staphylococcus aureus strain GN3]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=68413 CTB89_RS08400 WP_000844413.1 1692692..1692991(-) (comGE) [Staphylococcus aureus strain GN3]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |