Detailed information NTG0668077

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: MP387_RS00840
• Genome accession: NZ_CP094226
• Coordinates: 165675..166109 (+)
• Length: 144 a.a.
• NCBI ID: WP_242746960.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain 1648
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 160675..171109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MP387_RS00815 (MP387_00815)	nagA	161749..162900 (+)	1152	WP_001134442.1	N-acetylglucosamine-6-phosphate deacetylase	-
MP387_RS00820 (MP387_00820)	-	163053..163418 (+)	366	WP_000286396.1	DUF1033 family protein	-
MP387_RS00825 (MP387_00825)	comGA/cglA/cilD	163482..164423 (+)	942	WP_242746934.1	competence type IV pilus ATPase ComGA	Machinery gene
MP387_RS00830 (MP387_00830)	comGB/cglB	164371..165387 (+)	1017	WP_242748017.1	competence type IV pilus assembly protein ComGB	Machinery gene
MP387_RS00835 (MP387_00835)	comGC/cglC	165389..165712 (+)	324	WP_000735798.1	competence type IV pilus major pilin ComGC	Machinery gene
MP387_RS00840 (MP387_00840)	comGD/cglD	165675..166109 (+)	435	WP_242746960.1	competence type IV pilus minor pilin ComGD	Machinery gene
MP387_RS00845 (MP387_00845)	comGE/cglE	166072..166374 (+)	303	WP_242746963.1	competence type IV pilus minor pilin ComGE	Machinery gene
MP387_RS00850 (MP387_00850)	comGF/cglF	166337..166798 (+)	462	WP_242746966.1	competence type IV pilus minor pilin ComGF	Machinery gene
MP387_RS00855 (MP387_00855)	comGG/cglG	166776..167189 (+)	414	WP_242746969.1	competence type IV pilus minor pilin ComGG	Machinery gene
MP387_RS00860 (MP387_00860)	-	167222..167812 (+)	591	WP_242746972.1	class I SAM-dependent methyltransferase	-
MP387_RS00865 (MP387_00865)	comYH	167871..168824 (+)	954	WP_242746975.1	class I SAM-dependent methyltransferase	Machinery gene
MP387_RS00870 (MP387_00870)	-	168875..170065 (+)	1191	WP_242746978.1	acetate kinase	-
MP387_RS00875 (MP387_00875)	rnpA	170215..170586 (+)	372	WP_000748120.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15817.22 Da
• Isoelectric Point: 10.4335

>NTDB_id=668077 MP387_RS00840 WP_242746960.1 165675..166109(+) (comGD/cglD) [Streptococcus oralis strain 1648]
MQNKKQVKLLQIKAFTMLESLLVLGLVSILGLGLSGSVQSSFAAVEEQVFFMEFEELYRETQKRSLASQQKTSLNLDGQT
ISNGSQNLTVPKGIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=668077 MP387_RS00840 WP_242746960.1 165675..166109(+) (comGD/cglD) [Streptococcus oralis strain 1648]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCCTTTACTATGCTGGAAAGTCTCTTAGTTTTGGGACTTGT
GAGTATCCTTGGTTTAGGATTGTCTGGCTCTGTCCAGTCCAGTTTTGCAGCGGTAGAGGAGCAGGTTTTCTTTATGGAGT
TTGAAGAACTCTATCGTGAAACGCAAAAACGCAGTCTAGCCAGTCAGCAAAAGACCAGTCTGAACTTAGATGGACAGACA
ATCAGCAATGGGAGTCAAAACTTGACCGTTCCTAAAGGAATTCAGGCACCATCAGGACAAAGCATTATATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGCAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	91.667	100	0.917
comGD/cglD	Streptococcus pneumoniae Rx1	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae D39	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae R6	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae TIGR4	93.233	92.361	0.861
comGD/cglD	Streptococcus mitis SK321	93.233	92.361	0.861
comYD	Streptococcus gordonii str. Challis substr. CH1	56.589	89.583	0.507
comYD	Streptococcus mutans UA140	48.062	89.583	0.431
comYD	Streptococcus mutans UA159	48.062	89.583	0.431