Detailed information NTG0660903

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG709_RS11240
• Genome accession: NZ_CP108455
• Coordinates: 2448945..2450237 (-)
• Length: 430 a.a.
• NCBI ID: WP_250298433.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01267
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2443945..2455237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG709_RS11225 (OG709_11230)	-	2444009..2445022 (+)	1014	WP_329165864.1	rod shape-determining protein	-
OG709_RS11230 (OG709_11235)	-	2445098..2447719 (-)	2622	WP_266643185.1	valine--tRNA ligase	-
OG709_RS11235 (OG709_11240)	-	2447858..2448877 (+)	1020	WP_329165865.1	hypothetical protein	-
OG709_RS11240 (OG709_11245)	clpX	2448945..2450237 (-)	1293	WP_250298433.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG709_RS11245 (OG709_11250)	clpP	2450395..2451078 (-)	684	WP_284347844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG709_RS11250 (OG709_11255)	-	2451129..2451734 (-)	606	WP_329169094.1	ATP-dependent Clp protease proteolytic subunit	-
OG709_RS11255 (OG709_11260)	tig	2452026..2453429 (-)	1404	WP_329165870.1	trigger factor	-
OG709_RS11270 (OG709_11275)	-	2453925..2454119 (-)	195	WP_250298436.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47145.90 Da
• Isoelectric Point: 4.7809

>NTDB_id=660903 OG709_RS11240 WP_250298433.1 2448945..2450237(-) (clpX) [Streptomyces sp. NBC_01267]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=660903 OG709_RS11240 WP_250298433.1 2448945..2450237(-) (clpX) [Streptomyces sp. NBC_01267]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGGACCAACCG
CGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACACTGCTCGCCCAGA
CCCTGGCCCGGATGCTCAACGTCCCGTTCGCCATTGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACGACCGCCTCGGTACCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGTTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTTCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGTCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGTGGGCTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGGGCAACGACGGCCGCCACGA
GAAGTCCGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.488	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509