Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ML603_RS00745 | Genome accession | NZ_CP092887 |
| Coordinates | 119004..119957 (+) | Length | 317 a.a. |
| NCBI ID | WP_192942722.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain Karl | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 114004..124957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ML603_RS00705 (ML603_00705) | - | 114830..115195 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| ML603_RS00710 (ML603_00710) | comYA | 115276..116217 (+) | 942 | WP_241067295.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ML603_RS00715 (ML603_00715) | comYB | 116153..117184 (+) | 1032 | WP_241067698.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ML603_RS00720 (ML603_00720) | comYC | 117186..117512 (+) | 327 | WP_192942720.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ML603_RS00725 (ML603_00725) | comGD | 117487..117915 (+) | 429 | WP_256867278.1 | competence type IV pilus minor pilin ComGD | - |
| ML603_RS00730 (ML603_00730) | comGE | 117872..118168 (+) | 297 | WP_003061797.1 | competence type IV pilus minor pilin ComGE | - |
| ML603_RS00735 (ML603_00735) | comGF | 118149..118589 (+) | 441 | WP_003061780.1 | competence type IV pilus minor pilin ComGF | - |
| ML603_RS00740 (ML603_00740) | comGG | 118618..118941 (+) | 324 | WP_226955945.1 | competence type IV pilus minor pilin ComGG | - |
| ML603_RS00745 (ML603_00745) | comYH | 119004..119957 (+) | 954 | WP_192942722.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ML603_RS00750 (ML603_00750) | - | 120016..121212 (+) | 1197 | WP_084916957.1 | acetate kinase | - |
| ML603_RS00755 (ML603_00755) | - | 121518..121724 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| ML603_RS00760 (ML603_00760) | - | 121827..122507 (+) | 681 | WP_249631374.1 | type II CAAX endopeptidase family protein | - |
| ML603_RS00765 (ML603_00765) | - | 122525..122962 (+) | 438 | WP_143927079.1 | hypothetical protein | - |
| ML603_RS00770 (ML603_00770) | proC | 123055..123882 (-) | 828 | WP_256867161.1 | pyrroline-5-carboxylate reductase | - |
| ML603_RS00775 (ML603_00775) | pepA | 123878..124945 (-) | 1068 | WP_143927081.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35990.91 Da Isoelectric Point: 4.8674
>NTDB_id=660904 ML603_RS00745 WP_192942722.1 119004..119957(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVTQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKGGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPTETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVTQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKGGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPTETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=660904 ML603_RS00745 WP_192942722.1 119004..119957(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTACCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAGGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGTTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGGTGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGTTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCTTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGACAGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTACCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAGGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGTTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGGTGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGTTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCTTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGACAGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |