Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | L6173_RS16360 | Genome accession | NZ_CP091781 |
| Coordinates | 3541870..3542277 (-) | Length | 135 a.a. |
| NCBI ID | WP_149501300.1 | Uniprot ID | - |
| Organism | Stenotrophomonas maltophilia strain PSKL2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3536870..3547277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6173_RS16350 (L6173_16350) | pilR | 3538415..3539788 (+) | 1374 | WP_005410795.1 | sigma-54 dependent transcriptional regulator | Regulator |
| L6173_RS16355 (L6173_16355) | pilB | 3539914..3541647 (-) | 1734 | WP_005410796.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| L6173_RS16360 (L6173_16360) | pilA/pilAI | 3541870..3542277 (-) | 408 | WP_149501300.1 | pilin | Machinery gene |
| L6173_RS16365 (L6173_16365) | - | 3542427..3542870 (-) | 444 | WP_149501301.1 | pilin | - |
| L6173_RS16370 (L6173_16370) | pilC | 3543223..3544482 (+) | 1260 | WP_049451230.1 | type II secretion system F family protein | Machinery gene |
| L6173_RS16375 (L6173_16375) | - | 3544490..3545353 (+) | 864 | WP_049451231.1 | A24 family peptidase | - |
| L6173_RS16380 (L6173_16380) | coaE | 3545365..3545976 (+) | 612 | WP_049451232.1 | dephospho-CoA kinase | - |
| L6173_RS16385 (L6173_16385) | - | 3546236..3546622 (-) | 387 | WP_005410802.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14316.51 Da Isoelectric Point: 6.6929
>NTDB_id=653634 L6173_RS16360 WP_149501300.1 3541870..3542277(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain PSKL2]
MNTQKGFTLIELMIVVAIIAILAAIATVAFQPYVVRTQLTAALADITPGKTKVEILVNEGRSVSLVTPNYIGVAQNVHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSADGIWSCDGSAFEARYRPTGC
MNTQKGFTLIELMIVVAIIAILAAIATVAFQPYVVRTQLTAALADITPGKTKVEILVNEGRSVSLVTPNYIGVAQNVHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSADGIWSCDGSAFEARYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=653634 L6173_RS16360 WP_149501300.1 3541870..3542277(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain PSKL2]
ATGAACACGCAGAAGGGCTTCACGCTCATCGAGCTGATGATCGTGGTGGCCATCATCGCCATCTTGGCGGCGATCGCGAC
GGTGGCGTTCCAGCCCTACGTCGTACGCACGCAGCTGACCGCCGCACTGGCCGACATCACGCCGGGCAAGACCAAGGTGG
AAATCCTCGTCAATGAGGGCCGTTCGGTCAGCCTGGTCACACCGAACTACATCGGTGTCGCCCAGAACGTCCACTGCTCC
AACGTCGAAGCCGAACTCAGCGACTCCGGTGTCGGCCACATCAGCTGCACCCTGAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCGGCCGATGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
ATGAACACGCAGAAGGGCTTCACGCTCATCGAGCTGATGATCGTGGTGGCCATCATCGCCATCTTGGCGGCGATCGCGAC
GGTGGCGTTCCAGCCCTACGTCGTACGCACGCAGCTGACCGCCGCACTGGCCGACATCACGCCGGGCAAGACCAAGGTGG
AAATCCTCGTCAATGAGGGCCGTTCGGTCAGCCTGGTCACACCGAACTACATCGGTGTCGCCCAGAACGTCCACTGCTCC
AACGTCGAAGCCGAACTCAGCGACTCCGGTGTCGGCCACATCAGCTGCACCCTGAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCGGCCGATGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
52.206 |
100 |
0.526 |
| pilA | Pseudomonas aeruginosa PAK |
40.268 |
100 |
0.444 |
| pilA | Acinetobacter baumannii strain A118 |
42.336 |
100 |
0.43 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.963 |
100 |
0.43 |
| comP | Acinetobacter baylyi ADP1 |
36.054 |
100 |
0.393 |
| pilA | Vibrio cholerae C6706 |
35.172 |
100 |
0.378 |
| pilA | Vibrio cholerae strain A1552 |
35.172 |
100 |
0.378 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
35.172 |
100 |
0.378 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
36.232 |
100 |
0.37 |