Detailed information NTG0645781

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: L1A15_RS09000
• Genome accession: NZ_CP090884
• Coordinates: 1740598..1740993 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282442.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain MD5403
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1735598..1745993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1A15_RS08975 (L1A15_08975)	-	1736056..1736394 (-)	339	WP_001809290.1	helix-turn-helix transcriptional regulator	-
L1A15_RS08980 (L1A15_08980)	-	1736407..1737180 (-)	774	WP_000566049.1	class I SAM-dependent methyltransferase	-
L1A15_RS08985 (L1A15_08985)	-	1737626..1738382 (-)	757	Protein_1762	epoxyqueuosine reductase QueH	-
L1A15_RS08990 (L1A15_08990)	groL	1738520..1740142 (-)	1623	WP_000031573.1	chaperonin GroEL	-
L1A15_RS08995 (L1A15_08995)	groES	1740158..1740442 (-)	285	WP_000917304.1	co-chaperone GroES	-
L1A15_RS09000 (L1A15_09000)	ssbB/cilA	1740598..1740993 (-)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
L1A15_RS09005 (L1A15_09005)	-	1741071..1741832 (-)	762	WP_001107751.1	SDR family NAD(P)-dependent oxidoreductase	-
L1A15_RS09010 (L1A15_09010)	ytpR	1741874..1742500 (-)	627	WP_000578286.1	YtpR family tRNA-binding protein	-
L1A15_RS09015 (L1A15_09015)	-	1742516..1742833 (-)	318	WP_238892436.1	thioredoxin family protein	-
L1A15_RS09020 (L1A15_09020)	-	1742830..1743129 (-)	300	WP_001013974.1	DUF4651 domain-containing protein	-
L1A15_RS09025 (L1A15_09025)	-	1743327..1743407 (-)	81	WP_223200442.1	hypothetical protein	-
L1A15_RS09030 (L1A15_09030)	-	1743414..1743605 (-)	192	WP_000122504.1	hypothetical protein	-
L1A15_RS09035 (L1A15_09035)	-	1743766..1744440 (-)	675	WP_000725749.1	membrane protein	-
L1A15_RS09040 (L1A15_09040)	-	1744446..1744892 (-)	447	WP_000776589.1	LytTR family DNA-binding domain-containing protein	-
L1A15_RS09045 (L1A15_09045)	-	1745006..1745509 (-)	504	WP_000800942.1	phosphatase PAP2 family protein	-
L1A15_RS09050 (L1A15_09050)	-	1745506..1745868 (-)	363	WP_000078808.1	DUF2200 family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=645781 L1A15_RS09000 WP_000282442.1 1740598..1740993(-) (ssbB/cilA) [Streptococcus pneumoniae strain MD5403]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=645781 L1A15_RS09000 WP_000282442.1 1740598..1740993(-) (ssbB/cilA) [Streptococcus pneumoniae strain MD5403]
ATGTATAATAAAGTTATCTTGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae TIGR4	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	99.237	100	0.992
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.992	100	0.71
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	85.496	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	47.788	86.26	0.412
ssbB	Bacillus subtilis subsp. subtilis str. 168	44.444	82.443	0.366