Detailed information NTG0640193

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: FH100_RS10110
• Genome accession: NZ_CP090011
• Coordinates: 2007447..2007758 (+)
• Length: 103 a.a.
• NCBI ID: WP_002488514.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain acrlg
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2002447..2012758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FH100_RS10080 (FH100_10055)	-	2003230..2003433 (+)	204	WP_037555982.1	YqgQ family protein	-
FH100_RS10085 (FH100_10060)	-	2003430..2004416 (+)	987	WP_002449785.1	ROK family glucokinase	-
FH100_RS10090 (FH100_10065)	-	2004416..2004739 (+)	324	WP_002488539.1	MTH1187 family thiamine-binding protein	-
FH100_RS10095 (FH100_10070)	-	2004741..2005367 (+)	627	WP_002488554.1	MBL fold metallo-hydrolase	-
FH100_RS10100 (FH100_10075)	comGA	2005418..2006392 (+)	975	WP_002449861.1	competence type IV pilus ATPase ComGA	Machinery gene
FH100_RS10105 (FH100_10080)	comGB	2006364..2007428 (+)	1065	WP_002455292.1	competence type IV pilus assembly protein ComGB	-
FH100_RS10110 (FH100_10085)	comGC	2007447..2007758 (+)	312	WP_002488514.1	competence type IV pilus major pilin ComGC	Machinery gene
FH100_RS10115 (FH100_10090)	comGD	2007748..2008182 (+)	435	WP_002449773.1	competence type IV pilus minor pilin ComGD	-
FH100_RS10120 (FH100_10095)	-	2008374..2008871 (+)	498	WP_002449908.1	competence protein ComG	-
FH100_RS10125 (FH100_10100)	-	2009036..2009545 (+)	510	WP_002449809.1	shikimate kinase	-
FH100_RS10130 (FH100_10105)	gcvT	2009737..2010828 (+)	1092	WP_002488553.1	glycine cleavage system aminomethyltransferase GcvT	-
FH100_RS10135 (FH100_10110)	gcvPA	2010845..2012197 (+)	1353	WP_002455298.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11451.61 Da
• Isoelectric Point: 9.1845

>NTDB_id=640193 FH100_RS10110 WP_002488514.1 2007447..2007758(+) (comGC) [Staphylococcus hominis strain acrlg]
MKKFKHKLKAFTLIEMLLVLLIISVLLILIIPNITKQMAHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLITEGFI
KQGQSSCKSGETISIKNGEAVAE

Nucleotide

• Length: 312 bp

>NTDB_id=640193 FH100_RS10110 WP_002488514.1 2007447..2007758(+) (comGC) [Staphylococcus hominis strain acrlg]
ATGAAAAAATTCAAACATAAATTAAAAGCTTTTACTTTAATCGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCAAACATAACTAAACAAATGGCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAATAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (7-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	80.392	99.029	0.796
comGC	Staphylococcus aureus MW2	80.392	99.029	0.796
comGC/cglC	Streptococcus mitis SK321	47.917	93.204	0.447
comGC/cglC	Streptococcus pneumoniae R6	46.875	93.204	0.437
comGC/cglC	Streptococcus pneumoniae TIGR4	46.875	93.204	0.437
comGC/cglC	Streptococcus pneumoniae Rx1	46.875	93.204	0.437
comGC/cglC	Streptococcus pneumoniae D39	46.875	93.204	0.437
comYC	Streptococcus mutans UA159	48.315	86.408	0.417
comYC	Streptococcus mutans UA140	48.315	86.408	0.417
comGC	Bacillus subtilis subsp. subtilis str. 168	45.263	92.233	0.417
comYC	Streptococcus gordonii str. Challis substr. CH1	47.727	85.437	0.408
comGC/cglC	Streptococcus mitis NCTC 12261	49.398	80.583	0.398
comYC	Streptococcus suis isolate S10	46.512	83.495	0.388
comGC	Lactococcus lactis subsp. cremoris KW2	48.718	75.728	0.369